RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLC6A15Q9H2J7 730 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 GIMAP4Q9NUV9 329 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 ALKBH4Q9NXW9 302 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 MAT2BQ9NZL9 334 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 SPRR3Q9UBC9 169 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 PRODH2Q9UF12 536 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 UTS2RQ9UKP6 389 aa10.17□□□□□ -0.78
CCDC47-206ENST00000584112 H3BQF6 201 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 GLRA3O75311 464 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 PPM1BO75688 479 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 TRAPPC6AO75865 159 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 BCAS2O75934 225 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ABCB1P08183 1280 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-206ENST00000584112 FAM153BP0C7A2 387 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 BMP7P18075 431 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 CASP3P42574 277 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 TRPC1P48995 793 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 MGAT2Q10469 447 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 HEPACAMQ14CZ8 416 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 EXOSC7Q15024 291 aaKnown RBP10.16□□□□□ -0.78
CCDC47-206ENST00000584112 SLC25A35Q3KQZ1 300 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 FAM153CQ494X1 144 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 TCHHL1Q5QJ38 904 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-206ENST00000584112 RIPPLY2Q5TAB7 128 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 RTL6Q6ICC9 239 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 TMEM81Q6P7N7 255 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 FAM111BQ6SJ93 734 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ARSKQ6UWY0 536 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 NUP54Q7Z3B4 507 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 PM20D2Q8IYS1 436 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 PRR22Q8IZ63 422 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ADCY4Q8NFM4 1077 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ZNF675Q8TD23 568 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ROBO4Q8WZ75 1007 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 CTHRC1Q96CG8 243 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ERP27Q96DN0 273 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 TRIM44Q96DX7 344 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-206ENST00000584112 DTNBP1Q96EV8 351 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 TMEM41AQ96HV5 264 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ITPAQ9BY32 194 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ACPTQ9BZG2 426 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 METTL7AQ9H8H3 244 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 PLEKHF2Q9H8W4 249 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 PPCSQ9HAB8 311 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 PFDN4Q9NQP4 134 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 TBK1Q9UHD2 729 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 ZNF639Q9UID6 485 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 DLGAP4Q9Y2H0 992 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 C15orf41Q9Y2V0 281 aa10.16□□□□□ -0.78
CCDC47-206ENST00000584112 C15orf38-AP3S2A0A0A6YYH1 394 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 A0A0G2JNJ9 132 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 SERTM1A2A2V5 107 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 HSPB2A8KAH6 182 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 AHRRA9YTQ3 701 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 CBX7O95931 251 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 HPNP05981 417 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 IL3P08700 152 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 MYL2P10916 166 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 DRD5P21918 477 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 CFPP27918 469 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 TIA1P31483 386 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC47-206ENST00000584112 GCKP35557 465 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 PPICP45877 212 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 CDK9P50750 372 aaKnown RBP10.15□□□□□ -0.78
CCDC47-206ENST00000584112 PSPHP78330 225 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 DMTNQ08495 405 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 PLCXD2Q0VAA5 305 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 DUSP8Q13202 625 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 SNTA1Q13424 505 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 TOMM20Q15388 145 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 HSPB2Q16082 182 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 NNATQ16517 81 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 ERCC6LQ2NKX8 1250 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 BICRALQ6AI39 1079 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 SLC30A6Q6NXT4 461 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 GALNT18Q6P9A2 607 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 EIF1ADQ8N9N8 165 aaKnown RBP10.15□□□□□ -0.78
CCDC47-206ENST00000584112 OR52R1Q8NGF1 315 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 OR1J4Q8NGS1 313 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 MZB1Q8WU39 189 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 OMA1Q96E52 524 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 CNRIP1Q96F85 164 aaPredicted RBP10.15□□□□□ -0.78
CCDC47-206ENST00000584112 ZNF681Q96N22 645 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 OSBPL11Q9BXB4 747 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 AMBRA1Q9C0C7 1298 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 UBQLN3Q9H347 655 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 EHD3Q9NZN3 535 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 HEY2Q9UBP5 337 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 Q9UFV3 132 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 CBLCQ9ULV8 474 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 DTX4Q9Y2E6 619 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 PLLPQ9Y342 182 aa10.15□□□□□ -0.78
CCDC47-206ENST00000584112 FRG2CA6NGY1 282 aa10.14□□□□□ -0.79
CCDC47-206ENST00000584112 TO15178 435 aa10.14□□□□□ -0.79
CCDC47-206ENST00000584112 CRCPO75575 148 aa10.14□□□□□ -0.79
CCDC47-206ENST00000584112 CHN1P15882 459 aa10.14□□□□□ -0.79
CCDC47-206ENST00000584112 ADH7P40394 386 aa10.14□□□□□ -0.79
CCDC47-206ENST00000584112 PEX19P40855 299 aa10.14□□□□□ -0.79
CCDC47-206ENST00000584112 KIR2DL3P43628 341 aa10.14□□□□□ -0.79
CCDC47-206ENST00000584112 CCT5P48643 541 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms