RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 WLSQ5T9L3 541 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 OR52E8Q6IFG1 317 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 FAM180BQ6P0A1 224 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 TMEM64Q6YI46 380 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 WDR75Q8IWA0 830 aaKnown RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 FBXW8Q8N3Y1 598 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 ARFGAP2Q8N6H7 521 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 FNDC5Q8NAU1 212 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 FAM76AQ8TAV0 307 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 SLC22A8Q8TCC7 542 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 PAQR8Q8TEZ7 354 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 GFM2Q969S9 779 aaKnown RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 SARAFQ96BY9 339 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 POM121Q96HA1 1249 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 SENP5Q96HI0 755 aaPredicted RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 FBXL20Q96IG2 436 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 EGLN2Q96KS0 407 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 JSRP1Q96MG2 331 aaPredicted RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 C1orf50Q9BV19 199 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 AKTIPQ9H8T0 292 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 CCM2LQ9NUG4 571 aaPredicted RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 DNAJB12Q9NXW2 375 aaKnown RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 HEY2Q9UBP5 337 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 BAIAP2L1Q9UHR4 511 aa14.36□□□□□ -0.11
SKA2-209ENST00000583976 CHCHD2Q9Y6H1 151 aaPredicted RBP14.36□□□□□ -0.11
SKA2-209ENST00000583976 HDAC3O15379 428 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 SUSD5O60279 629 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 CTAG2O75638 210 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 GPR75O95800 540 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 SDC1P18827 310 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 PIK3R1P27986 724 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 ZNF763Q0D2J5 394 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 SLC10A1Q14973 349 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 HEPACAMQ14CZ8 416 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 EBPQ15125 230 aaKnown RBP14.35□□□□□ -0.11
SKA2-209ENST00000583976 BICRALQ6AI39 1079 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 SLC48A1Q6P1K1 146 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 ULK2Q8IYT8 1036 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 LRRC25Q8N386 305 aaPredicted RBP14.35□□□□□ -0.11
SKA2-209ENST00000583976 OR4K14Q8NGD5 310 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 CLHC1Q8NHS4 586 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 PIWIL2Q8TC59 973 aaKnown RBP14.35□□□□□ -0.11
SKA2-209ENST00000583976 METTL2AQ96IZ6 378 aaKnown RBP14.35□□□□□ -0.11
SKA2-209ENST00000583976 TSSK3Q96PN8 268 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 WWTR1Q9GZV5 400 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 CRIM1Q9NZV1 1036 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 CNOT11Q9UKZ1 510 aaKnown RBP14.35□□□□□ -0.11
SKA2-209ENST00000583976 TMED5Q9Y3A6 229 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 FREM3P0C091 2139 aa14.35□□□□□ -0.11
SKA2-209ENST00000583976 NAV3Q8IVL0 2385 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 FLNAP21333 2647 aaKnown RBP14.34□□□□□ -0.11
SKA2-209ENST00000583976 GOLGA8QA0A0J9YX86 632 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 GOLGA8OA6NCC3 632 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 GOLGA8NF8WBI6 632 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 HCN1O60741 890 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 FBXO45P0C2W1 286 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 BCKDHAP12694 445 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 DRD2P14416 443 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 ALOX15P16050 662 aaPredicted RBP14.34□□□□□ -0.11
SKA2-209ENST00000583976 UQCRC1P31930 480 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 FEN1P39748 380 aaKnown RBP14.34□□□□□ -0.11
SKA2-209ENST00000583976 XKP51811 444 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 CEBPEQ15744 281 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 SLC25A35Q3KQZ1 300 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 RIPPLY2Q5TAB7 128 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 IL23RQ5VWK5 629 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 SLC22A10Q63ZE4 541 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 ARSKQ6UWY0 536 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 LIX1Q8N485 282 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 EXOSC8Q96B26 276 aaKnown RBP14.34□□□□□ -0.11
SKA2-209ENST00000583976 KLHL29Q96CT2 875 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 RBM18Q96H35 190 aaKnown RBP14.34□□□□□ -0.11
SKA2-209ENST00000583976 FCRL1Q96LA6 429 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 C7orf26Q96N11 449 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 WDR55Q9H6Y2 383 aaPredicted RBP14.34□□□□□ -0.11
SKA2-209ENST00000583976 MEAF6Q9HAF1 191 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 ZFP64Q9NPA5 681 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 MYNNQ9NPC7 610 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 UTS2RQ9UKP6 389 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 CES1P1Q9UKY3 287 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 BOKQ9UMX3 212 aaPredicted RBP14.34□□□□□ -0.11
SKA2-209ENST00000583976 PLEKHA6Q9Y2H5 1048 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 NINQ8N4C6 2090 aa14.34□□□□□ -0.11
SKA2-209ENST00000583976 ABCA4P78363 2273 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 SLCO1B7G3V0H7 640 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 AKAP10O43572 662 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 OR10H2O60403 315 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 GDF1P27539 372 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 MAPK1P28482 360 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 EPHA3P29320 983 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 SSTR4P31391 388 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 GUCY1A3Q02108 690 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 ZNF267Q14586 743 aaPredicted RBP14.33□□□□□ -0.12
SKA2-209ENST00000583976 ACSF3Q4G176 576 aaPredicted RBP14.33□□□□□ -0.12
SKA2-209ENST00000583976 SLC9B1Q4ZJI4 515 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 FAM71E1Q6IPT2 247 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 RNF111Q6ZNA4 994 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 TNIP2Q8NFZ5 429 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 NEIL3Q8TAT5 605 aa14.33□□□□□ -0.12
SKA2-209ENST00000583976 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.33□□□□□ -0.123e-19■■■■■ 77.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms