RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 SLC25A42Q86VD7 318 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 MAPK1IP1LQ8NDC0 245 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 SELENOMQ8WWX9 145 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 UBXN6Q9BZV1 441 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 CCSER1Q9C0I3 900 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 ADNPQ9H2P0 1102 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 RNF41Q9H4P4 317 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 LPAR2Q9HBW0 351 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 ESM1Q9NQ30 184 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 TRPV5Q9NQA5 729 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 YAE1D1Q9NRH1 226 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 MBD2Q9UBB5 411 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 GALPQ9UBC7 116 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 GHRLQ9UBU3 117 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 ZNF346Q9UL40 294 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 FOXJ3Q9UPW0 622 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 AP1M2Q9Y6Q5 423 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 MYH15Q9Y2K3 1946 aa2.97□□□□□ -1.93
SMCHD1-209ENST00000583441 GRIN2DO15399 1336 aa2.96□□□□□ -1.93
SMCHD1-209ENST00000583441 TRBV7-9A0A0J9YWB2 115 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 MFSD2BA6NFX1 497 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 RPL37AP8A6NKH3 93 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 C11orf98E9PRG8 122 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 K7ERI5 159 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 CHADO15335 359 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 TYROBPO43914 113 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 RANBP6O60518 1105 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 IDH1O75874 414 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ANP32DO95626 131 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 SEMA4FO95754 770 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 IGSF6O95976 241 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 AK1P00568 194 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 HOXB7P09629 217 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ZCCHC18P0CG32 403 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 CALCBP10092 127 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 CYP11B1P15538 503 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 RFC2P35250 354 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 MDH1P40925 334 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ELK3P41970 407 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 EMDP50402 254 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 POLR2FP61218 127 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 OSTNP61366 133 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF85Q03923 595 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 C17orf58Q2M2W7 97 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 SNAI3Q3KNW1 292 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 DCAF4L1Q3SXM0 396 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 HIGD2BQ4VC39 106 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 TMEM41BQ5BJD5 291 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF311Q5JNZ3 666 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 BEND6Q5SZJ8 279 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF343Q6P1L6 599 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ISLR2Q6UXK2 745 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF562Q6V9R5 426 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 GTSCR1Q86UQ5 136 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 CCDC36Q8IYA8 594 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 POM121L12Q8N7R1 296 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF491Q8N8L2 437 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 ZBTB44Q8NCP5 570 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 OR4Q3Q8NH05 313 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 OR2L2Q8NH16 312 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 OR52J3Q8NH60 311 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 RSPH1Q8WYR4 309 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 SYAP1Q96A49 352 aaPredicted RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 NTNG2Q96CW9 530 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 VPS35Q96QK1 796 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 KAT8Q9H7Z6 458 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 DCAF13Q9NV06 445 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 DUS2Q9NX74 493 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 CHMP2BQ9UQN3 213 aa2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 EIF3LQ9Y262 564 aaKnown RBP2.96□□□□□ -1.94
SMCHD1-209ENST00000583441 TRABD2BA6NFA1 517 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 WASHC1A8K0Z3 465 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF487B1APH4 448 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 SHISA9B4DS77 424 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 E2F3O00716 465 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 PI15O43692 258 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 GALR3O60755 368 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 RAMP1O60894 148 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 APBB3O95704 486 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 RENP00797 406 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 CA3P07451 260 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 H2AFZP0C0S5 128 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 UQCRBP14927 111 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 H2AFXP16104 143 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 IGFBP5P24593 272 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 HTR2AP28223 471 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 HPDP32754 393 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 PTGER3P43115 390 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 TRPC1P48995 793 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 STK19P49842 368 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 ARHGDIAP52565 204 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 METAP1P53582 386 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 HAND2P61296 217 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 EXOSC2Q13868 293 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 TAF7Q15545 349 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 ZKSCAN8Q15776 578 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 ADPRMQ3LIE5 342 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 PRR5LQ6MZQ0 368 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 NIPAL3Q6P499 406 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 RFWD3Q6PCD5 774 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms