RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MLF1P58340 268 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 DSTNP60981 165 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 PSME3P61289 254 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 POU6F2P78424 691 aaPredicted RBP13.22□□□□□ -0.29
SKA2-205ENST00000580541 PSG6Q00889 435 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 BNIP1Q12981 228 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 CAPRIN1Q14444 709 aaKnown RBP13.22□□□□□ -0.29
SKA2-205ENST00000580541 CT45A2Q5DJT8 189 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 ACER2Q5QJU3 275 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 TCTN3Q6NUS6 607 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 C16orf62Q7Z3J2 963 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 SERPINA11Q86U17 422 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 SLC30A8Q8IWU4 369 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 PGAM4Q8N0Y7 254 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 CLEC4FQ8N1N0 589 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 ARHGAP24Q8N264 748 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 SIRT6Q8N6T7 355 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 SLC16A11Q8NCK7 471 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 TNIP2Q8NFZ5 429 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 THAP3Q8WTV1 239 aaPredicted RBP13.22□□□□□ -0.29
SKA2-205ENST00000580541 ASB15Q8WXK1 588 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 PMM1Q92871 262 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 C16orf58Q96GQ5 468 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 OR7D2Q96RA2 312 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 YIPF4Q9BSR8 244 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 OR51I1Q9H343 314 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 SLC6A13Q9NSD5 602 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 ZMIZ1Q9ULJ6 1067 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 CBLCQ9ULV8 474 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 ZNF451Q9Y4E5 1061 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 PCDHGB7Q9Y5F8 929 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 MED13Q9UHV7 2174 aa13.22□□□□□ -0.29
SKA2-205ENST00000580541 FREM2Q5SZK8 3169 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 WWP2O00308 870 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 GYG2O15488 501 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 ITGA10O75578 1167 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 OR2J2O76002 312 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 OR12D1P0DN82 309 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 T-ENOLP0DO92 83 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 HOXB9P17482 250 aaPredicted RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 ATP6V1C1P21283 382 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 SLC6A2P23975 617 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 PIGAP37287 484 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 MAP3K8P41279 467 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 HPCAP84074 193 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 RBBP4Q09028 425 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 DUSP8Q13202 625 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 CYP51A1Q16850 503 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 GTDC1Q4AE62 458 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 DNAL1Q4LDG9 190 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.21□□□□□ -0.29
SKA2-205ENST00000580541 TNFAIP8L2Q6P589 184 aaPredicted RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 ERICH5Q6P6B1 374 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 GPR155Q7Z3F1 870 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 HPS6Q86YV9 775 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 SLC34A3Q8N130 599 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 ZNF441Q8N8Z8 693 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 SIMC1Q8NDZ2 872 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 PNPT1Q8TCS8 783 aaKnown RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 PSMF1Q92530 271 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 SLC35A4Q96G79 324 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 AURKBQ96GD4 344 aaPredicted RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 CPPED1Q9BRF8 314 aaPredicted RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 ARHGAP9Q9BRR9 750 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 NXF5Q9H1B4 397 aaKnown RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 KAT8Q9H7Z6 458 aaKnown RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 CACYBPQ9HB71 228 aaKnown RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 HHATLQ9HCP6 504 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 POLE3Q9NRF9 147 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 ADA2Q9NZK5 511 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 P2RX2Q9UBL9 471 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 PCDHGA9Q9Y5G4 932 aaKnown RBP13.21□□□□□ -0.29
SKA2-205ENST00000580541 NPFFR2Q9Y5X5 522 aa13.21□□□□□ -0.29
SKA2-205ENST00000580541 A8MVJ9 347 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 C5orf58C9J3I9 102 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 TP53I11O14683 189 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 GMNNO75496 209 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 REM1O75628 298 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 CEACAM4O75871 244 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 CELA2AP08217 269 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 GUSBP08236 651 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 NR2F1P10589 423 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 ACP2P11117 423 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 BMP2P12643 396 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 IL12BP29460 328 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 CYB561P49447 251 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 MAN2A2P49641 1150 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 CLK3P49761 638 aaKnown RBP13.2□□□□□ -0.3
SKA2-205ENST00000580541 PNLIPRP2P54317 469 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 EEFSECP57772 596 aaKnown RBP13.2□□□□□ -0.3
SKA2-205ENST00000580541 MTPNP58546 118 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 PLCXD2Q0VAA5 305 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 EFR3AQ14156 821 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 DUSP5Q16690 384 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 ZNF630Q2M218 657 aaPredicted RBP13.2□□□□□ -0.3
SKA2-205ENST00000580541 ARHGAP11BQ3KRB8 267 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 GCNT6Q5T4J0 391 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 NUP54Q7Z3B4 507 aa13.2□□□□□ -0.3
SKA2-205ENST00000580541 MSRB3Q8IXL7 192 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms