RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 OR4C11Q6IEV9 310 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 NUP43Q8NFH3 380 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 CRELD1Q96HD1 420 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 NARS2Q96I59 477 aaKnown RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 SAMD8Q96LT4 415 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 DPH1Q9BZG8 443 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 SAP130Q9H0E3 1048 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 SOCS6O14544 535 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 DVL2O14641 736 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 B4GALT2O60909 372 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 POLR2CP19387 275 aaPredicted RBP12.86□□□□□ -0.35
NDEL1-204ENST00000578172 CENPAP49450 140 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 PRICKLE2Q7Z3G6 844 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 GATSQ8NAP1 163 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 GABARAPL1Q9H0R8 117 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 ENOPH1Q9UHY7 261 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 DNAJB5O75953 348 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 ALPPP05187 535 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 TYRP1P17643 537 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 GNG2P59768 71 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 CDK3Q00526 305 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 CDKL4Q5MAI5 379 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 ACOT4Q8N9L9 421 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 RIPOR3Q96MK2 946 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 PITX2Q99697 317 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 TEX12Q9BXU0 123 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 GABARAPL3Q9BY60 117 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 NLGN3Q9NZ94 848 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 J3QLW9 94 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF19P17023 458 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
NDEL1-204ENST00000578172 AMIGO1Q86WK6 493 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 CPOQ8IVL8 374 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 IZUMO1Q8IYV9 350 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF433Q8N7K0 673 aaPredicted RBP12.86□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF557Q8N988 423 aaPredicted RBP12.86□□□□□ -0.35
NDEL1-204ENST00000578172 CCL4L1Q8NHW4 92 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 NEIL3Q8TAT5 605 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 UFD1Q92890 307 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 BARHL1Q9BZE3 327 aa12.86□□□□□ -0.35
NDEL1-204ENST00000578172 DDX31Q9H8H2 851 aaKnown RBP12.86□□□□□ -0.35
NDEL1-204ENST00000578172 TMEM229AB2RXF0 380 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 EIF3FO00303 357 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-204ENST00000578172 SEMA7AO75326 666 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 RPN2P04844 631 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 CHRM4P08173 479 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 GDI1P31150 447 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 UNC5DQ6UXZ4 953 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 FBXL6Q8N531 539 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 PIK3R3Q92569 461 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ORAI1Q96D31 301 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 CXorf40BQ96DE9 158 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 IFT27Q9BW83 186 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
NDEL1-204ENST00000578172 MGAT4BQ9UQ53 548 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 HEATR5BQ9P2D3 2071 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 CSNK2A2P19784 350 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-204ENST00000578172 GCGRP47871 477 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 MTNR1AP48039 350 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 CTBP2P56545 445 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 FAM78AQ5JUQ0 283 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 SLC27A4Q6P1M0 643 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 PRSS58Q8IYP2 241 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 Q8N402 240 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 SLC16A11Q8NCK7 471 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ANKK1Q8NFD2 765 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 OR52I1Q8NGK6 324 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 PATE1Q8WXA2 126 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 C11orf24Q96F05 449 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-204ENST00000578172 NEUROD4Q9HD90 331 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 INSL6Q9Y581 213 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 N6AMT1Q9Y5N5 214 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 A0A1W2PQU0 124 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 A0A1W2PRG6 482 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ANKRD34BA5PLL1 514 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 TOXO94900 526 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 MYL9P24844 172 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 BLVRAP53004 296 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 DUSP2Q05923 314 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 P2RY14Q15391 338 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF362Q5T0B9 420 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF793Q6ZN11 406 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 VASH1Q7L8A9 365 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-204ENST00000578172 PHC2Q8IXK0 858 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 OR2L2Q8NH16 312 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 SLC35B4Q969S0 331 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF354BQ96LW1 612 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 MS4A8Q9BY19 250 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 C11orf54Q9H0W9 315 aaPredicted RBP12.85□□□□□ -0.35
NDEL1-204ENST00000578172 ING3Q9NXR8 418 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 HCN2Q9UL51 889 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 MAPRE3Q9UPY8 281 aa12.85□□□□□ -0.35
NDEL1-204ENST00000578172 EDDM13A0A1B0GTR0 161 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 MEIOCA2RUB1 952 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 ADAP00813 363 aa12.84□□□□□ -0.35
NDEL1-204ENST00000578172 PRG2P13727 222 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms