RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SLC48A1Q6P1K1 146 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 METTL2BQ6P1Q9 378 aaKnown RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 CYS1Q717R9 158 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 CCDC91Q7Z6B0 441 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 LRRC8AQ8IWT6 810 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 PHC2Q8IXK0 858 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 L3MBTL4Q8NA19 623 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 OR52R1Q8NGF1 315 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 RHEBL1Q8TAI7 183 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 WDR20Q8TBZ3 569 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 TRPC4APQ8TEL6 797 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 GFM2Q969S9 779 aaKnown RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 TMBIM1Q969X1 311 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 SLC35A4Q96G79 324 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 PIGQQ9BRB3 760 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 STMN4Q9H169 189 aaPredicted RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 RNF122Q9H9V4 155 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 SMYD2Q9NRG4 433 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 MAT2BQ9NZL9 334 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 ZNF639Q9UID6 485 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 PLLPQ9Y342 182 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 TLN2Q9Y4G6 2542 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 ERAL1O75616 437 aaKnown RBP12.04□□□□□ -0.48
COPS3-214ENST00000577246 PIAS1O75925 651 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 SOX30O94993 753 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 CLDN9O95484 217 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 CGAP01215 116 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 KLK1P06870 262 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 GRK2P25098 689 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 IDUAP35475 653 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 ALDH18A1P54886 795 aaKnown RBP12.04□□□□□ -0.48
COPS3-214ENST00000577246 RPS3AP61247 264 aaKnown RBP12.04□□□□□ -0.48
COPS3-214ENST00000577246 KRTAP1-1Q07627 177 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 GTF2H2Q13888 395 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 GANABQ14697 944 aaKnown RBP12.04□□□□□ -0.48
COPS3-214ENST00000577246 SLMAPQ14BN4 828 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 EXOSC7Q15024 291 aaKnown RBP12.04□□□□□ -0.48
COPS3-214ENST00000577246 PFKFB4Q16877 469 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 FAM83EQ2M2I3 478 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 GRTP1Q5TC63 336 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 RAET1LQ5VY80 246 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 GTF2H2CQ6P1K8 395 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 FAM214BQ7L5A3 538 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 HIPK1Q86Z02 1210 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 ZNF610Q8N9Z0 462 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 ADOQ96SZ5 270 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 PINK1Q9BXM7 581 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 IPPKQ9H8X2 491 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 HEY2Q9UBP5 337 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 ACOT9Q9Y305 439 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 EMC9Q9Y3B6 208 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 PCDHA9Q9Y5H5 950 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 ZNF780BQ9Y6R6 833 aa12.04□□□□□ -0.48
COPS3-214ENST00000577246 CXorf49A8MYA2 514 aaPredicted RBP12.03□□□□□ -0.48
COPS3-214ENST00000577246 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 ZIC3O60481 467 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 CBX7O95931 251 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 NID1P14543 1247 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 TCP1P17987 556 aaKnown RBP12.03□□□□□ -0.48
COPS3-214ENST00000577246 TCEA1P23193 301 aaKnown RBP12.03□□□□□ -0.48
COPS3-214ENST00000577246 FEN1P39748 380 aaKnown RBP12.03□□□□□ -0.48
COPS3-214ENST00000577246 GPX6P59796 221 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 MGAT2Q10469 447 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 PON3Q15166 354 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 EXOC3L2Q2M3D2 409 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 ANKRD34AQ69YU3 496 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 TTC19Q6DKK2 380 aaPredicted RBP12.03□□□□□ -0.48
COPS3-214ENST00000577246 OR5M10Q6IEU7 315 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 FAM111BQ6SJ93 734 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 CTAGE3PQ8IX95 158 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 KLHL7Q8IXQ5 586 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 FIG4Q92562 907 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 KLHL29Q96CT2 875 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 BTBD9Q96Q07 612 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 FAIM2Q9BWQ8 316 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 REG4Q9BYZ8 158 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 TRIM31Q9BZY9 425 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 SDHAF3Q9NRP4 125 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 PPP4R1LQ9P1A2 415 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 STOML1Q9UBI4 398 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 GPR55Q9Y2T6 319 aaPredicted RBP12.03□□□□□ -0.48
COPS3-214ENST00000577246 RNF11Q9Y3C5 154 aa12.03□□□□□ -0.48
COPS3-214ENST00000577246 RTTNQ86VV8 2226 aa12.02□□□□□ -0.48
COPS3-214ENST00000577246 A0A087X1B8 175 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 TCRBV9S1A1TA0A576 114 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 FAM159BA6NKW6 160 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 EIF3HO15372 352 aaKnown RBP eCLIP12.02□□□□□ -0.49
COPS3-214ENST00000577246 SEC14L5O43304 696 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 KLF4O43474 513 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 CD5LO43866 347 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 PLGP00747 810 aaPredicted RBP12.02□□□□□ -0.49
COPS3-214ENST00000577246 F12P00748 615 aaPredicted RBP12.02□□□□□ -0.49
COPS3-214ENST00000577246 GSTA2P09210 222 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 MTHFD2P13995 350 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 SSTR1P30872 391 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 EMDP50402 254 aa12.02□□□□□ -0.49
COPS3-214ENST00000577246 PNLIPRP2P54317 469 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms