RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 GPALPP1Q8IXQ4 340 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 DND1Q8IYX4 353 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 SLC34A3Q8N130 599 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 COX18Q8N8Q8 333 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 TEX19Q8NA77 164 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 DNAJB8Q8NHS0 232 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 RP9Q8TA86 221 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 OMA1Q96E52 524 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 GIMAP5Q96F15 307 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 OTUB1Q96FW1 271 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 C5orf34Q96MH7 638 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 CCDC106Q9BWC9 280 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 TRIM4Q9C037 500 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 SLC52A3Q9NQ40 469 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 GPATCH2Q9NW75 528 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 PCDHGB3Q9Y5G1 929 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 PIEZO2Q9H5I5 2752 aa13.4□□□□□ -0.26
NPLOC4-218ENST00000574964 TRAV17A0A0B4J275 112 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 ASPDHA6ND91 283 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 DUXAA6NLW8 204 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 TP53I11O14683 189 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 TO15178 435 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 ZNF354AO60765 605 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 NKX2-2O95096 273 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 NADKO95544 446 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 ACP2P11117 423 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 CD46P15529 392 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 ABCD3P28288 659 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 IL12BP29460 328 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 PSMD4P55036 377 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 CASP9P55211 416 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 RPS26P62854 115 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 DUSP5Q16690 384 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 DECR1Q16698 335 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 GTDC1Q4AE62 458 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 CYP27C1Q4G0S4 372 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 ZNF468Q5VIY5 522 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 SAXO2Q658L1 398 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 NPSR1Q6W5P4 371 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 RTL4Q6ZR62 310 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 DHDDSQ86SQ9 333 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 RNF130Q86XS8 419 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 POU5F2Q8N7G0 328 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 PCYOX1LQ8NBM8 494 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 SLC16A11Q8NCK7 471 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 CATSPER1Q8NEC5 780 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 OR5M3Q8NGP4 307 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 PNPT1Q8TCS8 783 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 ZFP90Q8TF47 636 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 TMBIM1Q969X1 311 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 SPACA9Q96E40 222 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 NEURL3Q96EH8 262 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 RMND5BQ96G75 393 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 PHF12Q96QT6 1004 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 OR7D2Q96RA2 312 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 STACQ99469 402 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 PAIP1Q9H074 479 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 MYLK2Q9H1R3 596 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 PIGUQ9H490 435 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 RAD21L1Q9H4I0 556 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 TPT1P8Q9HAU6 139 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 IL1RL2Q9HB29 575 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 TIMMDC1Q9NPL8 285 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 CBLCQ9ULV8 474 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 PCDHB14Q9Y5E9 798 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 FREM3P0C091 2139 aa13.39□□□□□ -0.27
NPLOC4-218ENST00000574964 EVPLLA8MZ36 301 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 CLIC1O00299 241 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 MRASO14807 208 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 ATXN7O15265 892 aaPredicted RBP13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 HS6ST1O60243 411 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 PPM1BO75688 479 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 FBXO45P0C2W1 286 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 COX4I1P13073 169 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 NAGAP17050 411 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 PPIBP23284 216 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 KHKP50053 298 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 TNFSF10P50591 281 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 RPP38P78345 283 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 POU6F2P78424 691 aaPredicted RBP13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 MRPS22P82650 360 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 LRIF1Q5T3J3 769 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 ATAD3BQ5T9A4 648 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 REP15Q6BDI9 236 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 SPINK14Q6IE38 97 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 TNFAIP8L2Q6P589 184 aaPredicted RBP13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 RETREG3Q86VR2 466 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 DPP10Q8N608 796 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 RBMXL3Q8N7X1 1067 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 OR4N2Q8NGD1 307 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 OR5D16Q8NGK9 328 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 PIK3R3Q92569 461 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 CDS1Q92903 461 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 CMTM5Q96DZ9 223 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 SGCZQ96LD1 299 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 SIGLEC12Q96PQ1 595 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 OR51I1Q9H343 314 aa13.38□□□□□ -0.27
NPLOC4-218ENST00000574964 DUSP22Q9NRW4 184 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms