RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 PCDHGB3Q9Y5G1 929 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 ERVH48-1M5A8F1 160 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 NME6O75414 186 aaPredicted RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 NADKO95544 446 aaPredicted RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 AGR2O95994 175 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 ACP2P11117 423 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 MATN1P21941 496 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 NNATQ16517 81 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 CYP27C1Q4G0S4 372 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 C16orf47Q6ZP98 133 aaPredicted RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 TRPM8Q7Z2W7 1104 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 MSRB3Q8IXL7 192 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 TMEM156Q8N614 296 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 SLC16A11Q8NCK7 471 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 FBXO30Q8TB52 745 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 ASB15Q8WXK1 588 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 AURKBQ96GD4 344 aaPredicted RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 CGREF1Q99674 301 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 PIGUQ9H490 435 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 EFCAB1Q9HAE3 211 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 CACNA1GO43497 2377 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 CLIC1O00299 241 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 MAN2A2P49641 1150 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 PLCXD2Q0VAA5 305 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 FADDQ13158 208 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 DUSP5Q16690 384 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 RNF130Q86XS8 419 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 SLC34A3Q8N130 599 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 OR52N2Q8NGI0 321 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 GPR151Q8TDV0 419 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 ABHD17AQ96GS6 310 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 YIPF4Q9BSR8 244 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 SERHL2Q9H4I8 314 aa15.78■□□□□ 0.12
NUP88-210ENST00000574867 MRTO4Q9UKD2 239 aaKnown RBP15.78■□□□□ 0.12
NUP88-210ENST00000574867 NAGAP17050 411 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 GABRA3P34903 492 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 RPS26P62854 115 aaKnown RBP15.77■□□□□ 0.12
NUP88-210ENST00000574867 GLIPR1L2Q4G1C9 344 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 IGFL3Q6UXB1 125 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 WDR53Q7Z5U6 358 aaPredicted RBP15.77■□□□□ 0.12
NUP88-210ENST00000574867 COX18Q8N8Q8 333 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 LRRC58Q96CX6 371 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 ANKRD27Q96NW4 1050 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 OR7D2Q96RA2 312 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 UTP23Q9BRU9 249 aaKnown RBP15.77■□□□□ 0.12
NUP88-210ENST00000574867 OR51I1Q9H343 314 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 IL1RL2Q9HB29 575 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 CBLCQ9ULV8 474 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 NPFFR2Q9Y5X5 522 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 MGAQ8IWI9 3026 aa15.77■□□□□ 0.12
NUP88-210ENST00000574867 EVPLLA8MZ36 301 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 FXYD1O00168 92 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 AIM2O14862 343 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 AK1P00568 194 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 FBXO45P0C2W1 286 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 FAM87AP0C7U9 286 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 ABCD3P28288 659 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 KRT20P35900 424 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 CYB561P49447 251 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 HLCSP50747 726 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 MNAT1P51948 309 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 RUNDC3AQ59EK9 446 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 HACD2Q6Y1H2 254 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 C9orf43Q8TAL5 461 aaPredicted RBP15.77■□□□□ 0.11
NUP88-210ENST00000574867 PNPT1Q8TCS8 783 aaKnown RBP15.77■□□□□ 0.11
NUP88-210ENST00000574867 SPACA9Q96E40 222 aaPredicted RBP15.77■□□□□ 0.11
NUP88-210ENST00000574867 CPPED1Q9BRF8 314 aaPredicted RBP15.77■□□□□ 0.11
NUP88-210ENST00000574867 TRIM45Q9H8W5 580 aaPredicted RBP15.77■□□□□ 0.11
NUP88-210ENST00000574867 ARL8BQ9NVJ2 186 aa15.77■□□□□ 0.11
NUP88-210ENST00000574867 THUMPD1Q9NXG2 353 aaKnown RBP15.77■□□□□ 0.11
NUP88-210ENST00000574867 DSPP15924 2871 aaKnown RBP15.77■□□□□ 0.11
NUP88-210ENST00000574867 C15orf38-AP3S2A0A0A6YYH1 394 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 OR5H15A6NDH6 313 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 A8MVJ9 347 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 WDPCPO95876 746 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 PIGAP37287 484 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 SOX3P41225 446 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 NUDT2P50583 147 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 MVDP53602 400 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 PSMD4P55036 377 aaKnown RBP15.76■□□□□ 0.11
NUP88-210ENST00000574867 ARG2P78540 354 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 DECR1Q16698 335 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.76■□□□□ 0.11
NUP88-210ENST00000574867 TNFAIP8L2Q6P589 184 aaPredicted RBP15.76■□□□□ 0.11
NUP88-210ENST00000574867 ARPINQ7Z6K5 226 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 HORMAD2Q8N7B1 307 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 OR5D16Q8NGK9 328 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 HAS2Q92819 552 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 SH3GL1Q99961 368 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 BTBD2Q9BX70 525 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 EXD2Q9NVH0 621 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 HPF1Q9NWY4 346 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 EXPH5Q8NEV8 1989 aa15.76■□□□□ 0.11
NUP88-210ENST00000574867 ZNF354AO60765 605 aaPredicted RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 ABCB7O75027 752 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 PPM1BO75688 479 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 OR6B1O95007 311 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 UNC5CO95185 931 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 SFTPCP11686 197 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 POU6F2P78424 691 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms