RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 C17orf51A8MQB3 221 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 SNPHO15079 494 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 RGS14O43566 566 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 WDR1O75083 606 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 TUBBP07437 444 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 CREB1P16220 341 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 MSX1P28360 303 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 ETV4P43268 484 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 GAS1P54826 345 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 PSG6Q00889 435 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 C2orf80Q0P641 193 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 SNTA1Q13424 505 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 C1orf185Q5T7R7 199 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 TIGD3Q6B0B8 471 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 NUP54Q7Z3B4 507 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 GDF7Q7Z4P5 450 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 FAM9CQ8IZT9 166 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 CA5BP1Q8WTZ4 195 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 C14orf79Q96F83 325 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 EGLN2Q96KS0 407 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 LURAP1Q96LR2 239 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 JSRP1Q96MG2 331 aaPredicted RBP15.8■□□□□ 0.12
SMG6-212ENST00000573153 CCT7Q99832 543 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 PRDM14Q9GZV8 571 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 LRTM1Q9HBL6 345 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 COQ3Q9NZJ6 369 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 B4GALT7Q9UBV7 327 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 TMED5Q9Y3A6 229 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 MED12Q93074 2177 aa15.8■□□□□ 0.12
SMG6-212ENST00000573153 CREBBPQ92793 2442 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 FAM90A27PA6NNH2 459 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 PLOD2O00469 737 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 TBX19O60806 448 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 ICOSLGO75144 302 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 SPAG7O75391 227 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 SEC22BO75396 215 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 CHEK2O96017 543 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 GDF1P27539 372 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 WNT3P56703 355 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 ZNF844Q08AG5 666 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 PLCXD2Q0VAA5 305 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 EIPR1Q53HC9 387 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 ZNF385BQ569K4 471 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 ARL13AQ5H913 290 aaPredicted RBP15.79■□□□□ 0.12
SMG6-212ENST00000573153 TMEM198Q66K66 360 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 VASNQ6EMK4 673 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 ACAD11Q709F0 780 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 CLYBLQ8N0X4 340 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 RELL2Q8NC24 303 aaPredicted RBP15.79■□□□□ 0.12
SMG6-212ENST00000573153 OR4N2Q8NGD1 307 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 TMBIM1Q969X1 311 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 TIMP4Q99727 224 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 MECRQ9BV79 373 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 GLIPR2Q9H4G4 154 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 LDAHQ9H6V9 325 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 FOLH1BQ9HBA9 442 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 EML4Q9HC35 981 aaKnown RBP15.79■□□□□ 0.12
SMG6-212ENST00000573153 SSU72Q9NP77 194 aaKnown RBP15.79■□□□□ 0.12
SMG6-212ENST00000573153 MIEF1Q9NQG6 463 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 PFDN4Q9NQP4 134 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 ACAD8Q9UKU7 415 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 TRAF6Q9Y4K3 522 aa15.79■□□□□ 0.12
SMG6-212ENST00000573153 POLQO75417 2590 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 C2orf72A6NCS6 295 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 OR6C70A6NIJ9 312 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 TMEM233B4DJY2 109 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 GNB5O14775 395 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 LSM1O15116 133 aaKnown RBP15.78■□□□□ 0.12
SMG6-212ENST00000573153 ABCB7O75027 752 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 CHRNGP07510 517 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 BPGMP07738 259 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 HOXD4P09016 255 aaPredicted RBP15.78■□□□□ 0.12
SMG6-212ENST00000573153 DLX5P56178 289 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 ACSF3Q4G176 576 aaPredicted RBP15.78■□□□□ 0.12
SMG6-212ENST00000573153 TNFAIP8L3Q5GJ75 292 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 WLSQ5T9L3 541 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 RIPPLY2Q5TAB7 128 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 CES4AQ5XG92 561 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 SLC30A6Q6NXT4 461 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 PACS2Q86VP3 889 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 HOXB13Q92826 284 aaPredicted RBP15.78■□□□□ 0.12
SMG6-212ENST00000573153 BBS4Q96RK4 519 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 OSBPL11Q9BXB4 747 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 UGT2B28Q9BY64 529 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 RTN4RQ9BZR6 473 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 TAS2R9Q9NYW1 312 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 C19orf53Q9UNZ5 99 aaPredicted RBP15.78■□□□□ 0.12
SMG6-212ENST00000573153 SLC6A5Q9Y345 797 aa15.78■□□□□ 0.12
SMG6-212ENST00000573153 UPK1AO00322 258 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 COQ9O75208 318 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 ERN1O75460 977 aaKnown RBP15.77■□□□□ 0.12
SMG6-212ENST00000573153 BMP7P18075 431 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 SDC1P18827 310 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 ELAVL4P26378 380 aaKnown RBP15.77■□□□□ 0.12
SMG6-212ENST00000573153 NTSP30990 170 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 CEACAM8P31997 349 aaPredicted RBP15.77■□□□□ 0.12
SMG6-212ENST00000573153 MC3RP41968 323 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 PDE7AQ13946 482 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 XKR7Q5GH72 579 aa15.77■□□□□ 0.12
SMG6-212ENST00000573153 WIPI1Q5MNZ9 446 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms