RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 GLIPR2Q9H4G4 154 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 NT5DC2Q9H857 520 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CUEDC1Q9NWM3 386 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 MCUBQ9NWR8 336 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CALML5Q9NZT1 146 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 PRKAG2Q9UGJ0 569 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 FEZF1A0PJY2 475 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 SGK494L7N484 410 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 ARSBP15848 533 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 CSTF1Q05048 431 aaKnown RBP10.12□□□□□ -0.79
CCDC40-207ENST00000572253 FLYWCH1Q4VC44 716 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF311Q5JNZ3 666 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 OR4C11Q6IEV9 310 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 KIF18BQ86Y91 864 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 ANKRD53Q8N9V6 530 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 OR56A1Q8NGH5 318 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 OR52N1Q8NH53 320 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 SUN5Q8TC36 379 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 SFXN5Q8TD22 340 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 HYLS1Q96M11 299 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 AMDHD1Q96NU7 426 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 GPA33Q99795 319 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 DPH7Q9BTV6 452 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 KRCC1Q9NPI7 259 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-207ENST00000572253 WASH6PQ9NQA3 447 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 ING4Q9UNL4 249 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 SATB2Q9UPW6 733 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 A0A087WUU8 490 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 A0A0G2JN53 185 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 K7ESM1 405 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 SYT5O00445 386 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 NOS1APO75052 506 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-207ENST00000572253 HMGN1P05114 100 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 STAT5AP42229 794 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 C19orf57Q0VDD7 668 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 P2RY14Q15391 338 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 TEAD2Q15562 447 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 HMGN2P46Q86SG4 172 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 MEX3DQ86XN8 651 aaKnown RBP10.12□□□□□ -0.79
CCDC40-207ENST00000572253 LRRC17Q8N6Y2 441 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 WFIKKN2Q8TEU8 576 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 CREB3L1Q96BA8 519 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 PHF21AQ96BD5 680 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 MOAP1Q96BY2 351 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 MARVELD1Q9BSK0 173 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 OR52A5Q9H2C5 316 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 FOLH1BQ9HBA9 442 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 MED17Q9NVC6 651 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 TNFRSF10DQ9UBN6 386 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 EXTL2Q9UBQ6 330 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 SLC9A3R1O14745 358 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-207ENST00000572253 CH25HO95992 272 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 DHFRP00374 187 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 GAAP10253 952 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 C6P13671 934 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 PAICSP22234 425 aaKnown RBP10.12□□□□□ -0.79
CCDC40-207ENST00000572253 GAS1P54826 345 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 EFNB1P98172 346 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 MAP4K2Q12851 820 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 RIN1Q13671 783 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 NDUFAF5Q5TEU4 345 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 PLEKHM3Q6ZWE6 761 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 MED30Q96HR3 178 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 SOSTQ9BQB4 213 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 CNIH4Q9P003 139 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 WNT6Q9Y6F9 365 aa10.12□□□□□ -0.79
CCDC40-207ENST00000572253 HELZP42694 1942 aaKnown RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 LOC102723532A0A0G2JNH3 316 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 CD8B2A6NJW9 211 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 CPSF4LA6NMK7 179 aaKnown RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 NCR1O76036 304 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 CHRM4P08173 479 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 CD8BP10966 210 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 PRR5P85299 388 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 MLLT1Q03111 559 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF791Q3KP31 576 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 IDNKQ5T6J7 187 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 PRAMEF8Q5VWM4 474 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 PRAMEF7Q5VXH5 474 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 TMEM64Q6YI46 380 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 MRGPREQ86SM8 312 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 GLCCI1Q86VQ1 547 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 POGLUT1Q8NBL1 392 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 TTLQ8NG68 377 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 OR4F15Q8NGB8 312 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 ANGPTL6Q8NI99 470 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 OR8D1Q8WZ84 308 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 OTUB2Q96DC9 234 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 FAM46AQ96IP4 442 aaKnown RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 SECISBP2Q96T21 854 aaKnown RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 RSPO3Q9BXY4 272 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 MED28Q9H204 178 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 DDX31Q9H8H2 851 aaKnown RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 ZC4H2Q9NQZ6 224 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 PRAMEF27A3QJZ7 478 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 WASHC1A8K0Z3 465 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 PLOD3O60568 738 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 RGS9O75916 674 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-207ENST00000572253 GNSP15586 552 aa10.11□□□□□ -0.79
CCDC40-207ENST00000572253 SOX18P35713 384 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms