RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 POLR2JP52435 117 aaKnown RBP13.92□□□□□ -0.18
RAB40B-203ENST00000570676 SMSP52788 366 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 SLC37A1P57057 533 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 EBPQ15125 230 aaKnown RBP13.92□□□□□ -0.18
RAB40B-203ENST00000570676 PIGGQ5H8A4 983 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 ANKRD26P1Q6NSI1 321 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 R3HCC1LQ7Z5L2 792 aaKnown RBP13.92□□□□□ -0.18
RAB40B-203ENST00000570676 MARVELD2Q8N4S9 558 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 FITM2Q8N6M3 262 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 GLB1L3Q8NCI6 653 aaPredicted RBP13.92□□□□□ -0.18
RAB40B-203ENST00000570676 OR7A2PQ8NGA2 310 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 PPCDCQ96CD2 204 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 RBM18Q96H35 190 aaKnown RBP13.92□□□□□ -0.18
RAB40B-203ENST00000570676 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 PRPF18Q99633 342 aaKnown RBP13.92□□□□□ -0.18
RAB40B-203ENST00000570676 VKORC1Q9BQB6 163 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 CNPPD1Q9BV87 410 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 TMEM45AQ9NWC5 275 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 ATP6V1HQ9UI12 483 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 HRH3Q9Y5N1 445 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 LIPGQ9Y5X9 500 aa13.92□□□□□ -0.18
RAB40B-203ENST00000570676 C19orf84I3L1E1 186 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 ACOT7O00154 380 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 NR5A2O00482 541 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 DYRK3O43781 588 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 CLDN14O95500 239 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 TPOP07202 933 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 DNASE1L1P49184 302 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 PPIAP62937 165 aaKnown RBP13.91□□□□□ -0.18
RAB40B-203ENST00000570676 FOXO1Q12778 655 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 PGS1Q32NB8 556 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 ZNF791Q3KP31 576 aaPredicted RBP13.91□□□□□ -0.18
RAB40B-203ENST00000570676 CPTPQ5TA50 214 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 GK5Q6ZS86 529 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 TRPM8Q7Z2W7 1104 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 TREML1Q86YW5 311 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 FUNDC1Q8IVP5 155 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 SLC22A8Q8TCC7 542 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 TESCQ96BS2 214 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 MTERF3Q96E29 417 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 SPACA9Q96E40 222 aaPredicted RBP13.91□□□□□ -0.18
RAB40B-203ENST00000570676 FAM173AQ9BQD7 235 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 WWTR1Q9GZV5 400 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 SACM1LQ9NTJ5 587 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 TUBA8Q9NY65 449 aaPredicted RBP13.91□□□□□ -0.18
RAB40B-203ENST00000570676 EHD3Q9NZN3 535 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 SH3BP4Q9P0V3 963 aa13.91□□□□□ -0.18
RAB40B-203ENST00000570676 CAPN14A8MX76 684 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 PGRMC2O15173 223 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 OR10H2O60403 315 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 IGHG3P01860 377 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 CT62P0C5K7 136 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 SLC35E2P0CK97 266 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 CD1EP15812 388 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 DDX5P17844 614 aaKnown RBP13.9□□□□□ -0.18
RAB40B-203ENST00000570676 CNR1P21554 472 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 S100A3P33764 101 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 ZFP36L2P47974 494 aaKnown RBP13.9□□□□□ -0.18
RAB40B-203ENST00000570676 DGKQP52824 942 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 PLGLB1Q02325 96 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 PDE7AQ13946 482 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 ZNF267Q14586 743 aaPredicted RBP13.9□□□□□ -0.18
RAB40B-203ENST00000570676 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 HYAL4Q2M3T9 481 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 DPY19L1Q2PZI1 675 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 FAM174BQ3ZCQ3 159 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 EMC4Q5J8M3 183 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 SPANXN4Q5MJ08 99 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 FAM91A1Q658Y4 838 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 SLC48A1Q6P1K1 146 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 ARHGAP11AQ6P4F7 1023 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 BLOC1S3Q6QNY0 202 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 RNF111Q6ZNA4 994 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 TMEM251Q8N6I4 163 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 PAQR8Q8TEZ7 354 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 RIT1Q92963 219 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 EXOSC8Q96B26 276 aaKnown RBP13.9□□□□□ -0.18
RAB40B-203ENST00000570676 KLHL29Q96CT2 875 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 GAL3ST4Q96RP7 486 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 DEFB127Q9H1M4 99 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 CXorf21Q9HAI6 301 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 IL1RL2Q9HB29 575 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 CHST11Q9NPF2 352 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 ATAD3AQ9NVI7 634 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB40B-203ENST00000570676 HCFC1P51610 2035 aa13.9□□□□□ -0.18
RAB40B-203ENST00000570676 LOC100653049A0A140TA62 436 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 CCT8L1PA6NM43 557 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 OR6C76A6NM76 312 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 TBX19O60806 448 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 KRT34O76011 436 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 PDE9AO76083 593 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 IL6P05231 212 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 SNRPB2P08579 225 aaKnown RBP13.89□□□□□ -0.19
RAB40B-203ENST00000570676 CELA3AP09093 270 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 FBXO45P0C2W1 286 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 LAMP1P11279 417 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 SSTR4P31391 388 aa13.89□□□□□ -0.19
RAB40B-203ENST00000570676 PIGAP37287 484 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms