RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 EPB42P16452 691 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 ITGA2P17301 1181 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 NT5EP21589 574 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 GRK2P25098 689 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 PIK3R1P27986 724 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 SLC6A8P48029 635 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 RAP1GDS1P52306 607 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 GAS1P54826 345 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 DSCR4P56555 118 aaPredicted RBP9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 MGAT2Q10469 447 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 DDX39BQ13838 428 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 FAM166AQ6J272 317 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 MED27Q6P2C8 311 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 BEND4Q6ZU67 534 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 TCAIMQ8N3R3 496 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 ZNF525Q8N782 197 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 NAT8LQ8N9F0 302 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 OR5M1Q8NGP8 315 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 TMCO6Q96DC7 493 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 DTNBP1Q96EV8 351 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 CERS2Q96G23 380 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 CNOT10Q9H9A5 744 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 LYARQ9NX58 379 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 CISD1Q9NZ45 108 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 EMC9Q9Y3B6 208 aa9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 HEATR1Q9H583 2144 aaKnown RBP9.32□□□□□ -0.92
CTDNEP1-202ENST00000570380 UQCRHLA0A096LP55 91 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 DPRXA6NFQ7 191 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 OR6C70A6NIJ9 312 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 H3BML4 177 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 TCF21O43680 179 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 DLX3O60479 287 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 RAMP1O60894 148 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 SS18L1O75177 396 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 FAM58BPP0C7Q3 252 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 USF1P22415 310 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 BSGP35613 385 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 XKP51811 444 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 TAS2R39P59534 338 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 BSPH1Q075Z2 132 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 EXOSC7Q15024 291 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 TSC22D1Q15714 1073 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 TAB1Q15750 504 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 PDLIM3Q53GG5 364 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 SPANXN3Q5MJ09 141 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 RAET1LQ5VY80 246 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 OR52E8Q6IFG1 317 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 FAM111BQ6SJ93 734 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 SEZ6L2Q6UXD5 910 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 IGDCC3Q8IVU1 814 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 RFLNBQ8N5W9 214 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 METTL25Q8N6Q8 603 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 ADCY4Q8NFM4 1077 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 SGMS2Q8NHU3 365 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 HUS1BQ8NHY5 278 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 RNF138Q8WVD3 245 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 HTRA1Q92743 480 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 UBE2E3Q969T4 207 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 TMBIM1Q969X1 311 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 ADAD1Q96M93 576 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 COL21A1Q96P44 957 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 DESI2Q9BSY9 194 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 CACNG6Q9BXT2 260 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 STMN4Q9H169 189 aaPredicted RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 C12orf65Q9H3J6 166 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 DDX31Q9H8H2 851 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 WDR41Q9HAD4 459 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 PLAC1Q9HBJ0 212 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 EML4Q9HC35 981 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 FANCFQ9NPI8 374 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 PPANQ9NQ55 473 aaKnown RBP9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 BCAP29Q9UHQ4 241 aa9.31□□□□□ -0.92
CTDNEP1-202ENST00000570380 LOC100289279A0A1B0GTE1 492 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 OR2M5A3KFT3 312 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 TO15178 435 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 CCNT2O60583 730 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 TSPAN2O60636 221 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 REM1O75628 298 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 TTC4O95801 387 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 FESP07332 822 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 FCGR2AP12318 317 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 CPMP14384 443 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 HK1P19367 917 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 HNF1AP20823 631 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 DRD5P21918 477 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 ADH6P28332 368 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 SERPINB1P30740 379 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 PPICP45877 212 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 GZMKP49863 264 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 ARFIP1P53367 373 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 CTBP2P56545 445 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 C21orf58P58505 322 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 RPS3AP61247 264 aaKnown RBP9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 SGCBQ16585 318 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 PRICKLE4Q2TBC4 344 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 MSS51Q4VC12 460 aa9.3□□□□□ -0.92
CTDNEP1-202ENST00000570380 C6orf163Q5TEZ5 329 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms