RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	HLA-DQB1	P01920	261 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	MAPK1	P28482	360 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	CTH	P32929	405 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	CDK3	Q00526	305 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	FLI1	Q01543	452 aa	Predicted RBP	11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	CHIT1	Q13231	466 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	NAE1	Q13564	534 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	TMEM196	Q5HYL7	178 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	ZNF776	Q68DI1	518 aa	Predicted RBP	11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	TSEN54	Q7Z6J9	526 aa	Known RBP	11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	OR4C15	Q8NGM1	316 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	OR56A3	Q8NH54	315 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	SELENOM	Q8WWX9	145 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	ST8SIA4	Q92187	359 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	FOPNL	Q96NB1	174 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	GABRG3	Q99928	467 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	MARVELD1	Q9BSK0	173 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	ZNF416	Q9BWM5	594 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	MND1	Q9BWT6	205 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	LGR4	Q9BXB1	951 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	POLR2J2	Q9GZM3	115 aa	Known RBP	11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	ELOVL6	Q9H5J4	265 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	PCDHB16	Q9NRJ7	776 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	EVA1B	Q9NVM1	165 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	MBD2	Q9UBB5	411 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	CLEC2D	Q9UHP7	191 aa		11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	ZFR2	Q9UPR6	939 aa	Known RBP	11.31	□□□□□ -0.6
SPG7-222	ENST00000569820	LRRC72	A6NJI9	287 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820		E7EQ34	232 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	FABP7	O15540	132 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	GMDS	O60547	372 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	UGDH	O60701	494 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	TPST2	O60704	377 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	SNAPIN	O95295	136 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	CPSF4	O95639	269 aa	Known RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	APOC1	P02654	83 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	JUP	P14923	745 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	TNFRSF1B	P20333	461 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	APEX1	P27695	318 aa	Known RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	ALDH6A1	Q02252	535 aa	Known RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	FGL2	Q14314	439 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	HKDC1	Q2TB90	917 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820		Q3ZCU0	254 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	LIPK	Q5VXJ0	399 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	CFAP77	Q6ZQR2	320 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	C16orf62	Q7Z3J2	963 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	COMMD7	Q86VX2	200 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	TIGD4	Q8IY51	512 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	CCDC36	Q8IYA8	594 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	TEX47	Q8TBZ9	253 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	ZNF431	Q8TF32	576 aa	Predicted RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	AP3S1	Q92572	193 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	GTPBP3	Q969Y2	492 aa	Known RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	FAM131C	Q96AQ9	280 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	MTERF3	Q96E29	417 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	MAPKAP1	Q9BPZ7	522 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	MBNL1	Q9NR56	388 aa	Known RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	TXNL4B	Q9NX01	149 aa	Known RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	ING4	Q9UNL4	249 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	PRKAB1	Q9Y478	270 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	MGAT4D	A6NG13	374 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	NPIPB8	E9PQR5	432 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	SSX5	O60225	188 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	NUDT7	P0C024	238 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	FAM157B	P0CG42	384 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	PRPH2	P23942	346 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	ACADL	P28330	430 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	NTSR1	P30989	418 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	INPP1	P49441	399 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	ABAT	P80404	500 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	MTAP	Q13126	283 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	C1D	Q13901	141 aa	Known RBP	11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	FRG2	Q64ET8	278 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	GPR155	Q7Z3F1	870 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	IL17RC	Q8NAC3	791 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	ZNF480	Q8WV37	535 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	PHF21A	Q96BD5	680 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	MED8	Q96G25	268 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	FRG2B	Q96QU4	278 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	OR52A5	Q9H2C5	316 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	DPEP2	Q9H4A9	486 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	GLS2	Q9UI32	602 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	MTCH2	Q9Y6C9	303 aa		11.3	□□□□□ -0.6
SPG7-222	ENST00000569820	F5	P12259	2224 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	NUMA1	Q14980	2115 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	SERTM1	A2A2V5	107 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	OR6C65	A6NJZ3	312 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820		A8MVJ9	347 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	INMT-MINDY4	F8WBC2	141 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ENTPD6	O75354	484 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	EGF	P01133	1207 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	COL9A1	P20849	921 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	CNR2	P34972	360 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	SELENOW	P63302	87 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	IRF8	Q02556	426 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	MLLT11	Q13015	90 aa	Predicted RBP	11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	BTN1A1	Q13410	526 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	IRF4	Q15306	451 aa		11.29	□□□□□ -0.6

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