RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 GPR152Q8TDT2 470 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 SCMH1Q96GD3 660 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 ADAM2Q99965 735 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 TNFRSF12AQ9NP84 129 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 FKBPLQ9UIM3 349 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 ADAM28Q9UKQ2 775 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 OAS3Q9Y6K5 1087 aaKnown RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 GBF1Q92538 1859 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 XIRP2A4UGR9 3374 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 UNC80Q8N2C7 3258 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 A0A1B0GVI7 797 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 SEPT4O43236 478 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 HSPA12AO43301 675 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 TGM5O43548 720 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 GJB3O75712 270 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 SPDEFO95238 335 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 CD2P06729 351 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 SNRPCP09234 159 aaKnown RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 ALDOCP09972 364 aaKnown RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 NME1P15531 152 aaKnown RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 GPX3P22352 226 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 PCSK1P29120 753 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 CHRNA4P43681 627 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 MTPNP58546 118 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 TUSC3Q13454 348 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 SF3A2Q15428 464 aaKnown RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 SPNS3Q6ZMD2 512 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 PTRH1Q86Y79 214 aaKnown RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 C10orf53Q8N6V4 93 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 OR10K1Q8NGX5 313 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 TCEAL4Q96EI5 215 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 FCRL2Q96LA5 508 aaPredicted RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 WDFY2Q96P53 400 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 KATNB1Q9BVA0 655 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 LHX9Q9NQ69 397 aa10.25□□□□□ -0.77
CLK3-226ENST00000569406 AKAP7Q9P0M2 348 aaPredicted RBP10.25□□□□□ -0.77
CLK3-226ENST00000569406 RFXAPO00287 272 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 GPR182O15218 404 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PIP5K1CO60331 668 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 WISP3O95389 354 aaPredicted RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 OTCP00480 354 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 QDPRP09417 244 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 ODC1P11926 461 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 ACPPP15309 386 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 GPR3P46089 330 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 NAE1Q13564 534 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 INO80DQ53TQ3 878 aaPredicted RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 ZNF789Q5FWF6 425 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PGAP1Q75T13 922 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 UXS1Q8NBZ7 420 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 TMEM185AQ8NFB2 350 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 FBLIM1Q8WUP2 373 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PPM1MQ96MI6 270 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 FCRL5Q96RD9 977 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 SAP130Q9H0E3 1048 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 ARL6Q9H0F7 186 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 ALG9Q9H6U8 611 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 ANKRA2Q9H9E1 313 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 B3GAT2Q9NPZ5 323 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 MAGEL2Q9UJ55 1249 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 BTRCQ9Y297 605 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PLEKHM1Q9Y4G2 1056 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 GNG14A0A1W2PPG7 69 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 NARSO43776 548 aaKnown RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 GLUD1P00367 558 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 NFYBP25208 207 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 FLT3LGP49771 235 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PRKCZQ05513 592 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 CLN3Q13286 438 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 NKG7Q16617 165 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 OCLNQ16625 522 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 SDHAF4Q5VUM1 108 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 CNIH2Q6PI25 160 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 FJX1Q86VR8 437 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 EIF4E3Q8N5X7 224 aaKnown RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 ACOT11Q8WXI4 607 aaPredicted RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 AP3S1Q92572 193 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 FAM162AQ96A26 154 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 HHIPQ96QV1 700 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 CCNL2Q96S94 520 aaPredicted RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 CHRDQ9H2X0 955 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 NT5DC2Q9H857 520 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 KCNIP3Q9Y2W7 256 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 NUBP2Q9Y5Y2 271 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PTGDR2Q9Y5Y4 395 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 A0A0A6YYC8 382 aaPredicted RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 I3L1I5 382 aaPredicted RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 CIDEAO60543 219 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 ZNF35P13682 527 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 CXCL2P19875 107 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 BLOC1S1P78537 153 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 ST3GAL4Q11206 333 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 MELKQ14680 651 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 SLC9A5Q14940 896 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 PEA15Q15121 130 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 LBHQ53QV2 105 aaPredicted RBP10.24□□□□□ -0.77
CLK3-226ENST00000569406 PAGE3Q5JUK9 113 aa10.24□□□□□ -0.77
CLK3-226ENST00000569406 CD276Q5ZPR3 534 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms