RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 CCDC68Q9H2F9 335 aa5.29□□□□□ -1.56
CDH13-212ENST00000569144 L2HGDHQ9H9P8 463 aa5.29□□□□□ -1.56
CDH13-212ENST00000569144 PELI2Q9HAT8 420 aa5.29□□□□□ -1.56
CDH13-212ENST00000569144 PARVBQ9HBI1 364 aa5.29□□□□□ -1.56
CDH13-212ENST00000569144 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.29□□□□□ -1.56
CDH13-212ENST00000569144 PTBP2Q9UKA9 531 aaKnown RBP5.29□□□□□ -1.56
CDH13-212ENST00000569144 DAPP1Q9UN19 280 aa5.29□□□□□ -1.56
CDH13-212ENST00000569144 LIPT1Q9Y234 373 aa5.29□□□□□ -1.56
CDH13-212ENST00000569144 REXO2Q9Y3B8 237 aaKnown RBP5.29□□□□□ -1.56
CDH13-212ENST00000569144 DOCK7Q96N67 2140 aa5.29□□□□□ -1.56
CDH13-212ENST00000569144 USF3Q68DE3 2245 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 EML6Q6ZMW3 1958 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 LRIT2A6NDA9 550 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 CAPN14A8MX76 684 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 AP3B1O00203 1094 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 PLOD2O00469 737 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TCF21O43680 179 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 OR10H2O60403 315 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 LDB3O75112 727 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 CDH16O75309 829 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TGM6O95932 706 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 CGAP01215 116 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 APRTP07741 180 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 HIST1H2AGP0C0S8 130 aaPredicted RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 HIST1H2ADP20671 130 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 HNF1AP20823 631 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TBXA2RP21731 343 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 IGFBP5P24593 272 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 CERS1P27544 350 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 GSTM2P28161 218 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 HNRNPH1P31943 449 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 STIP1P31948 543 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 CASP3P42574 277 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 MAGEA1P43355 309 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 STT3AP46977 705 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 NPY2RP49146 381 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TMED10P49755 219 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 LHX2P50458 406 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 RWDD2BP57060 319 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 RPP38P78345 283 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 IGLV3-21P80748 117 aaPredicted RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 KLF1Q13351 362 aaPredicted RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 FGFBP1Q14512 234 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 EBPQ15125 230 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 RBBP5Q15291 538 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 NRF1Q16656 503 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 FAM174BQ3ZCQ3 159 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TM4SF20Q53R12 229 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TIGD3Q6B0B8 471 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 CASC4Q6P4E1 433 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 ZNF549Q6P9A3 640 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TRMT10BQ6PF06 316 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 SBSNQ6UWP8 590 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 CES3Q6UWW8 571 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 RAD9BQ6WBX8 426 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 SLC29A4Q7RTT9 530 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 P4HA3Q7Z4N8 544 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TMPRSS11BQ86T26 416 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TMEM139Q8IV31 216 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 PALM2Q8IXS6 379 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TAGAPQ8N103 731 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 RFLNBQ8N5W9 214 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 ARIH2OSQ8N7S6 290 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TTLQ8NG68 377 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 OR2L5Q8NG80 312 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 OR1J4Q8NGS1 313 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 FBXL20Q96IG2 436 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 ZNF845Q96IR2 970 aaPredicted RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 HIST1H2AHQ96KK5 128 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TSNARE1Q96NA8 513 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 GAL3ST4Q96RP7 486 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 SERINC2Q96SA4 455 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 HIST1H2AJQ99878 128 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 H2AFJQ9BTM1 129 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 KLHL4Q9C0H6 718 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 OR2B2Q9GZK3 357 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 WWTR1Q9GZV5 400 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 EIF2B3Q9NR50 452 aaKnown RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 TEX10Q9NXF1 929 aaPredicted RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 WWOXQ9NZC7 414 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 BFARQ9NZS9 450 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 TFR2Q9UP52 801 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 DTX4Q9Y2E6 619 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 DLGAP4Q9Y2H0 992 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 MAGED1Q9Y5V3 778 aaPredicted RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 COMMD10Q9Y6G5 202 aa5.28□□□□□ -1.56
CDH13-212ENST00000569144 EPN1Q9Y6I3 576 aaPredicted RBP5.28□□□□□ -1.56
CDH13-212ENST00000569144 IQANK1A0A1B0GTG1 560 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 FAM234BA2RU67 622 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 CTAGE9A4FU28 777 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 PABPN1LA6NDY0 278 aaKnown RBP5.27□□□□□ -1.57
CDH13-212ENST00000569144 OR6C76A6NM76 312 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 EMC8O43402 210 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 SSX4O60224 188 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 NDUFS7O75251 213 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 IFNB1P01574 187 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 PTMAP06454 111 aaKnown RBP5.27□□□□□ -1.57
CDH13-212ENST00000569144 IGHV4-31P0DP07 118 aa5.27□□□□□ -1.57
CDH13-212ENST00000569144 SLC25A16P16260 332 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms