RNA–Protein interactions for RNA: ENST00000567705.5

INO80E-210, Transcript of INO80 complex subunit E, human

TSL 3 BASIC

Gene INO80E, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80E-210	ENST00000567705	RFC3	P40938	356 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	ZFP36L2	P47974	494 aa	Known RBP	15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	DNASE1L1	P49184	302 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	MRPL19	P49406	292 aa	Known RBP	15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	TBCEL	Q5QJ74	424 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	BICRAL	Q6AI39	1079 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	GK5	Q6ZS86	529 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	SPATA19	Q7Z5L4	167 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	PRR22	Q8IZ63	422 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	GOLGA6L1	Q8N7Z2	621 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	OR52N2	Q8NGI0	321 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	STON2	Q8WXE9	905 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	OR5P2	Q8WZ92	322 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	TMBIM1	Q969X1	311 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	FAM120B	Q96EK7	910 aa	Known RBP	15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	MAGEB18	Q96M61	343 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	OR52B2	Q96RD2	323 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	NODAL	Q96S42	347 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	DUSP26	Q9BV47	211 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	UBQLN3	Q9H347	655 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	CXorf36	Q9H7Y0	433 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	INTS9	Q9NV88	658 aa	Known RBP	15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	ATAD3A	Q9NVI7	634 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705	SEC14L3	Q9UDX4	400 aa		15.19	■□□□□ 0.02
INO80E-210	ENST00000567705		A0A1W2PRB8	838 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	TTC36	A6NLP5	189 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	NPIPA5	E9PKD4	350 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	RNASET2	O00584	256 aa	Known RBP	15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	TP53I11	O14683	189 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	HS6ST1	O60243	411 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	SEMA7A	O75326	666 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	UNC5C	O95185	931 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	GP1BB	P13224	206 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	EFNA1	P20827	205 aa	Predicted RBP	15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	GAS1	P54826	345 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	KCNK10	P57789	538 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	HBA1	P69905	142 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	PLCXD2	Q0VAA5	305 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	SNTA1	Q13424	505 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	GAB1	Q13480	694 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	CYP27C1	Q4G0S4	372 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	PRAMEF20	Q5VT98	475 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	FAM47E	Q6ZV65	393 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	ZGRF1	Q86YA3	2104 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	FAM13C	Q8NE31	585 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	FAM110B	Q8TC76	370 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	LRRC8C	Q8TDW0	803 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	SSC4D	Q8WTU2	575 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	PRPF18	Q99633	342 aa	Known RBP	15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	ZNF703	Q9H7S9	590 aa	Predicted RBP	15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	ZFP64	Q9NPA5	681 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	GPATCH2	Q9NW75	528 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	GIN1	Q9NXP7	522 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	NPIPA1	Q9UND3	350 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	USH1C	Q9Y6N9	552 aa		15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	SPTAN1	Q13813	2472 aa	Known RBP	15.18	■□□□□ 0.02
INO80E-210	ENST00000567705	NBPF19	A0A087WUL8	3843 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	UQCRHL	A0A096LP55	91 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	GOLGA8Q	A0A0J9YX86	632 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705		A0A1B0GVC2	190 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	GOLGA8O	A6NCC3	632 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705		B4DXG7	233 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	GOLGA8N	F8WBI6	632 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	EMC8	O43402	210 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	ABCB7	O75027	752 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	SNX4	O95219	450 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	RFPL3S	P0C7P2	107 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	MAN2A2	P49641	1150 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	PNLIPRP2	P54317	469 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	DPY19L1	Q2PZI1	675 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	LSM12	Q3MHD2	195 aa	Known RBP	15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	MFSD12	Q6NUT3	480 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	ZCCHC12	Q6PEW1	402 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	WDR53	Q7Z5U6	358 aa	Predicted RBP	15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	SLC44A2	Q8IWA5	706 aa	Predicted RBP	15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	TMEM251	Q8N6I4	163 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	CDRT4	Q8N9R6	151 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	NUP43	Q8NFH3	380 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	OR5M3	Q8NGP4	307 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	CEP70	Q8NHQ1	597 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	PRR7	Q8TB68	274 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	DIO2	Q92813	273 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	RELT	Q969Z4	430 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	TMEM41A	Q96HV5	264 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	RILP	Q96NA2	401 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	COL21A1	Q96P44	957 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	MS4A4E	Q96PG1	132 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	NEUROD4	Q9HD90	331 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	SDR39U1	Q9NRG7	319 aa	Predicted RBP	15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	QPCTL	Q9NXS2	382 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	ERRFI1	Q9UJM3	462 aa	Predicted RBP	15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	HRH3	Q9Y5N1	445 aa		15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	15.17	■□□□□ 0.02
INO80E-210	ENST00000567705	FADS1	O60427	444 aa		15.16	■□□□□ 0.02
INO80E-210	ENST00000567705	C6orf47	O95873	294 aa		15.16	■□□□□ 0.02
INO80E-210	ENST00000567705	IGKV1D-16	P01601	117 aa		15.16	■□□□□ 0.02
INO80E-210	ENST00000567705	RNF224	P0DH78	156 aa		15.16	■□□□□ 0.02
INO80E-210	ENST00000567705	ACP2	P11117	423 aa		15.16	■□□□□ 0.02
INO80E-210	ENST00000567705	MAGEA5	P43359	124 aa		15.16	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms