RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
SF3B3-206ENST00000565990 ADA2Q9NZK5 511 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 PTGFRNQ9P2B2 879 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 ERVK-19Q9WJR5 959 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 MAN2B2Q9Y2E5 1009 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 CPAMD8Q8IZJ3 1885 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 CCDC154A6NI56 674 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 TMEM200CA6NKL6 621 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 OR6C76A6NM76 312 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 FBP2O00757 339 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 CDK2AP1O14519 115 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 CFLARO15519 480 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 SORBS2O94875 1100 aaKnown RBP11.71□□□□□ -0.53
SF3B3-206ENST00000565990 C6orf47O95873 294 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 GPIP06744 558 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF26P17031 533 aaPredicted RBP11.71□□□□□ -0.53
SF3B3-206ENST00000565990 CAPN3P20807 821 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 PTPN6P29350 595 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 SSTR4P31391 388 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 MAP3K8P41279 467 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 CDK9P50750 372 aaKnown RBP11.71□□□□□ -0.53
SF3B3-206ENST00000565990 PGDP52209 483 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 POLE2P56282 527 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 KCNK10P57789 538 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 CXADRP78310 365 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 RNF4P78317 190 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 MYBPC3Q14896 1274 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 MAPKAPK3Q16644 382 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 TBR1Q16650 682 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 BTBD16Q32M84 506 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 VPS26BQ4G0F5 336 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 PPP4R4Q6NUP7 873 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 DHFR2Q86XF0 187 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 CHERPQ8IWX8 916 aaKnown RBP11.71□□□□□ -0.53
SF3B3-206ENST00000565990 CLECL1Q8IZS7 167 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 GALNT16Q8N428 558 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 DOK4Q8TEW6 326 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 GTF2H4Q92759 462 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 TP53INP1Q96A56 240 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 VPS33AQ96AX1 596 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 NPAS2Q99743 824 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 PKP2Q99959 881 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 YTHDF1Q9BYJ9 559 aaKnown RBP11.71□□□□□ -0.53
SF3B3-206ENST00000565990 LHPPQ9H008 270 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 PNPLA3Q9NST1 481 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 ACTR3BQ9P1U1 418 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 PCDHGB4Q9UN71 923 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 GMEB1Q9Y692 573 aa11.71□□□□□ -0.53
SF3B3-206ENST00000565990 TPRP12270 2363 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ZNF701M0R085 212 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 EMC8O43402 210 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 DNAJB5O75953 348 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ZFAND5O76080 213 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 CELA2AP08217 269 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ITGAMP11215 1152 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 EFNA1P20827 205 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 DRD5P21918 477 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 PTGER1P34995 402 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 TRPC1P48995 793 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 CCT3P49368 545 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 HSPB3Q12988 150 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 EXOSC7Q15024 291 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 LINC00303Q3SY05 128 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 EXOSC6Q5RKV6 272 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 LRIF1Q5T3J3 769 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ZCCHC12Q6PEW1 402 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 TMEM107Q6UX40 140 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 HSDL2Q6YN16 418 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 B3GNT6Q6ZMB0 384 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 PTRH1Q86Y79 214 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 LGI4Q8N135 537 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 LILRA2Q8N149 483 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 DPP10Q8N608 796 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ZNF441Q8N8Z8 693 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 CLEC1AQ8NC01 280 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 HIPK4Q8NE63 616 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 C17orf47Q8NEP4 570 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 C16orf52Q8NHV5 167 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 NUBPLQ8TB37 319 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ADIPOR1Q96A54 375 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 EME1Q96AY2 570 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 MOAP1Q96BY2 351 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 FAM120BQ96EK7 910 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 GIMAP5Q96F15 307 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 THOC3Q96J01 351 aaKnown RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ITCHQ96J02 903 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 LMF1Q96S06 567 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 CNPPD1Q9BV87 410 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 ANKRD60Q9BZ19 345 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 EPS8L2Q9H6S3 715 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 CXorf36Q9H7Y0 433 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 RMND5AQ9H871 391 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 C3orf14Q9HBI5 128 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 NEUROD4Q9HD90 331 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 CCM2LQ9NUG4 571 aaPredicted RBP11.7□□□□□ -0.54
SF3B3-206ENST00000565990 GIN1Q9NXP7 522 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 MAP10Q9P2G4 905 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 PRODH2Q9UF12 536 aa11.7□□□□□ -0.54
SF3B3-206ENST00000565990 CFL2Q9Y281 166 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms