RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 LRATO95237 230 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 IL33O95760 270 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 KRT6AP02538 564 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 KRT6BP04259 564 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 GSNP06396 782 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ENO1P06733 434 aaKnown RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 MSL3P1P0C860 447 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 PRR35P0CG20 571 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 BCKDHAP12694 445 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ALOX12P18054 663 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 CXCR2P25025 360 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 PPP2R1BP30154 601 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 GRK3P35626 688 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 PIK3CBP42338 1070 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ZFP36L2P47974 494 aaKnown RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 KRT6CP48668 564 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 SMSP52788 366 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 AQP5P55064 265 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 SESN3P58005 492 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ACY1Q03154 408 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 EGR3Q06889 387 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 SLAMF1Q13291 335 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ZNF267Q14586 743 aaPredicted RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 MPEG1Q2M385 716 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 AP5B1Q2VPB7 878 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 LSM12Q3MHD2 195 aaKnown RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 NKAIN1Q4KMZ8 207 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 SPDYAQ5MJ70 313 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 IL23RQ5VWK5 629 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 NOXRED1Q6NXP6 359 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 RPTNQ6XPR3 784 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 TSPYL5Q86VY4 417 aaPredicted RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 CARFQ8N187 725 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 KRTCAP2Q8N6L1 136 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 CAMKVQ8NCB2 501 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 SIMC1Q8NDZ2 872 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 TRPV3Q8NET8 790 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 VPS37AQ8NEZ2 397 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 OR2L5Q8NG80 312 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 C16orf78Q8WTQ4 265 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 NR4A3Q92570 626 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 RERGQ96A58 199 aaPredicted RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 RGMAQ96B86 450 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ANKRD9Q96BM1 317 aaPredicted RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 HSPBAP1Q96EW2 488 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 CMTM7Q96FZ5 175 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 PEX11GQ96HA9 241 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 C18orf12Q96KH6 178 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 C7orf26Q96N11 449 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ZNF559Q9BR84 538 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 TRMOQ9BU70 441 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 FAM107BQ9H098 131 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 ELOVL6Q9H5J4 265 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 DDX31Q9H8H2 851 aaKnown RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 MEAF6Q9HAF1 191 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 EML4Q9HC35 981 aaKnown RBP5.71□□□□□ -1.5
UBFD1-204ENST00000565634 NECTIN3Q9NQS3 549 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 LANCL2Q9NS86 450 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 IRAK4Q9NWZ3 460 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 LRFN1Q9P244 771 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 VPS29Q9UBQ0 182 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 CTSFQ9UBX1 484 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 SEC14L3Q9UDX4 400 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 DUSP13Q9UII6 198 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 MID2Q9UJV3 735 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 SNX6Q9UNH7 406 aa5.71□□□□□ -1.5
UBFD1-204ENST00000565634 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.71□□□□□ -1.54e-9■■■□□ 15.3
UBFD1-204ENST00000565634 ZANQ9Y493 2812 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 IGHV3-20A0A0C4DH32 117 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 GMNCA6NCL1 334 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 FAM90A27PA6NNH2 459 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 A8MUA0 341 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 PEX12O00623 359 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 ANKRD28O15084 1053 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 HDAC3O15379 428 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 PRKNO60260 465 aaPredicted RBP5.7□□□□□ -1.5
UBFD1-204ENST00000565634 B4GALT2O60909 372 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 LDB3O75112 727 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 CRCPO75575 148 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 CDC123O75794 336 aaPredicted RBP5.7□□□□□ -1.5
UBFD1-204ENST00000565634 KLF7O75840 302 aaPredicted RBP5.7□□□□□ -1.5
UBFD1-204ENST00000565634 UMODP07911 640 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 RAB40ALP0C0E4 278 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 FAM58BPP0C7Q3 252 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 C8orf89P0DMQ9 161 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 G6PDP11413 515 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 ALOX15P16050 662 aaPredicted RBP5.7□□□□□ -1.5
UBFD1-204ENST00000565634 SDC1P18827 310 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 HOXA5P20719 270 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 MAOAP21397 527 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 HIST1H1TP22492 207 aaPredicted RBP5.7□□□□□ -1.5
UBFD1-204ENST00000565634 SERPINB5P36952 375 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 DGKQP52824 942 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 LIM2P55344 173 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 TAS2R50P59544 299 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 UFM1P61960 85 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 CBX1P83916 185 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 ASPHQ12797 758 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 MYBPHQ13203 477 aa5.7□□□□□ -1.5
UBFD1-204ENST00000565634 CUL3Q13618 768 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms