RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TMBIM1Q969X1 311 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 TMCO6Q96DC7 493 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 FAM120BQ96EK7 910 aaKnown RBP14.72□□□□□ -0.05
RAB40C-208ENST00000564703 PANX1Q96RD7 426 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 FAM173AQ9BQD7 235 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 OLAHQ9NV23 265 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 BTNL2Q9UIR0 455 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 CBLCQ9ULV8 474 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 VPS4AQ9UN37 437 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 PCDHGB3Q9Y5G1 929 aa14.72□□□□□ -0.05
RAB40C-208ENST00000564703 FAM234BA2RU67 622 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 C9JVG2 144 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 HS6ST1O60243 411 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 KCNH1O95259 989 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 PSMG1O95456 288 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 HMGN2P05204 90 aaKnown RBP14.71□□□□□ -0.05
RAB40C-208ENST00000564703 UQCRC2P22695 453 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 MEOX1P50221 254 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 PNLIPRP2P54317 469 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 FBXW4P57775 412 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 KCNK10P57789 538 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 GPR85P60893 370 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 KCNJ2P63252 427 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 PHC1P78364 1004 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 PSG6Q00889 435 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 ALDH6A1Q02252 535 aaKnown RBP14.71□□□□□ -0.05
RAB40C-208ENST00000564703 PLGLB1Q02325 96 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 GAB1Q13480 694 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 EFR3AQ14156 821 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 TBCELQ5QJ74 424 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 GK5Q6ZS86 529 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 OR10G3Q8NGC4 313 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 SFXN5Q8TD22 340 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 ADAMTS15Q8TE58 950 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 PAQR8Q8TEZ7 354 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 COL21A1Q96P44 957 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 SECISBP2Q96T21 854 aaKnown RBP14.71□□□□□ -0.05
RAB40C-208ENST00000564703 LMF2Q9BU23 707 aaKnown RBP14.71□□□□□ -0.05
RAB40C-208ENST00000564703 TMEM120AQ9BXJ8 343 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 CXorf36Q9H7Y0 433 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 SIRT3Q9NTG7 399 aaPredicted RBP14.71□□□□□ -0.05
RAB40C-208ENST00000564703 MRGBPQ9NV56 204 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 TMEM45AQ9NWC5 275 aa14.71□□□□□ -0.05
RAB40C-208ENST00000564703 OR6C70A6NIJ9 312 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 DUXAA6NLW8 204 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 SCN2BO60939 215 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 ANP32DO95626 131 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 CCL3P10147 92 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 CHI3L1P36222 383 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-208ENST00000564703 PIGAP37287 484 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 ATP4BP51164 291 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 ELOAQ14241 798 aaKnown RBP14.7□□□□□ -0.06
RAB40C-208ENST00000564703 SQLEQ14534 574 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 LASP1Q14847 261 aaKnown RBP14.7□□□□□ -0.06
RAB40C-208ENST00000564703 AGKQ53H12 422 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 PRR30Q53SZ7 412 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-208ENST00000564703 MFSD12Q6NUT3 480 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 ZNF621Q6ZSS3 439 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 C6orf120Q7Z4R8 191 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 WDR53Q7Z5U6 358 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-208ENST00000564703 OR5AK3PQ8NH89 298 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 SPPL2AQ8TCT8 520 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 ITCHQ96J02 903 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 CCDC115Q96NT0 180 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 TAAR6Q96RI8 345 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 ADOQ96SZ5 270 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 YIPF4Q9BSR8 244 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 ACTRT3Q9BYD9 372 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 METTL7AQ9H8H3 244 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 CCDC167Q9P0B6 97 aa14.7□□□□□ -0.06
RAB40C-208ENST00000564703 CHCHD2Q9Y6H1 151 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-208ENST00000564703 RNF103-CHMP3A0A140T963 221 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 ANKRD33BA6NCL7 494 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 ASPDHA6ND91 283 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 CCDC154A6NI56 674 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 G3V3Y1 287 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 ACOT7O00154 380 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 RFXANKO14593 260 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 SNX4O95219 450 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 MATN1P21941 496 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 RFX3P48380 749 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 MRPL19P49406 292 aaKnown RBP14.69□□□□□ -0.06
RAB40C-208ENST00000564703 CLK3P49761 638 aaKnown RBP14.69□□□□□ -0.06
RAB40C-208ENST00000564703 SF3A3Q12874 501 aaKnown RBP eCLIP14.69□□□□□ -0.06
RAB40C-208ENST00000564703 PRAMEF20Q5VT98 475 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 NPSR1Q6W5P4 371 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 MSANTD1Q6ZTZ1 278 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 PACS2Q86VP3 889 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 FBXW8Q8N3Y1 598 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 CPSF7Q8N684 471 aaKnown RBP14.69□□□□□ -0.06
RAB40C-208ENST00000564703 SLC16A11Q8NCK7 471 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 OR2M7Q8NG81 312 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 OR4N2Q8NGD1 307 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 C16orf58Q96GQ5 468 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 JSRP1Q96MG2 331 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-208ENST00000564703 ZNF317Q96PQ6 595 aaPredicted RBP14.69□□□□□ -0.06
RAB40C-208ENST00000564703 DOHHQ9BU89 302 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 TRIM4Q9C037 500 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 GIN1Q9NXP7 522 aa14.69□□□□□ -0.06
RAB40C-208ENST00000564703 KLHL14Q9P2G3 628 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms