RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 WDSUB1Q8N9V3 476 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 RELL2Q8NC24 303 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 NAXEQ8NCW5 288 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 C16orf78Q8WTQ4 265 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 TMBIM1Q969X1 311 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 VSTM2LQ96N03 204 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 TRIB1Q96RU8 372 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 FOXC2Q99958 501 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 POLDIP3Q9BY77 421 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 ACPTQ9BZG2 426 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 ACBD3Q9H3P7 528 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 PPCSQ9HAB8 311 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 RASSF1Q9NS23 344 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 JKAMPQ9P055 326 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 PSMC3IPQ9P2W1 217 aaPredicted RBP11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 C2CD3Q4AC94 2353 aa11.1□□□□□ -0.63
GTF3C1-204ENST00000564664 A0A087WV62 115 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 TTC36A6NLP5 189 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 TSPAN2O60636 221 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 COQ9O75208 318 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 ERN1O75460 977 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 RCBTB2O95199 551 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 ANXA4P09525 319 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 IFI6P09912 130 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 PYGBP11216 843 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 EPXP11678 715 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 DDCP20711 480 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 SRD5A2P31213 254 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 TIA1P31483 386 aaKnown RBP eCLIP11.09□□□□□ -0.636e-6■□□□□ 11.3
GTF3C1-204ENST00000564664 CCT5P48643 541 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 ZNF136P52737 540 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 ART1P52961 327 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 DUSP2Q05923 314 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 SLC29A2Q14542 456 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 LTB4RQ15722 352 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 NNATQ16517 81 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 CCDC153Q494R4 210 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 CYP27C1Q4G0S4 372 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 LARP4Q71RC2 724 aaKnown RBP eCLIP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 YRDCQ86U90 279 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 ZZZ3Q8IYH5 903 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 FAM9CQ8IZT9 166 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 CHDHQ8NE62 594 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 OR14L1PQ8NHC6 308 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 GOT1L1Q8NHS2 421 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 RNF138Q8WVD3 245 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 WNT2BQ93097 391 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 EXOSC8Q96B26 276 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 APIPQ96GX9 242 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 BBS4Q96RK4 519 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 HBEGFQ99075 208 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 SFXN3Q9BWM7 321 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 TXLNGYQ9BZA5 131 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 CLEC4MQ9H2X3 399 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 EPB41L4BQ9H329 900 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 HHATLQ9HCP6 504 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 SDHAF3Q9NRP4 125 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 TAS2R10Q9NYW0 307 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 CRIM1Q9NZV1 1036 aa11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 MRTO4Q9UKD2 239 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-204ENST00000564664 MPDZO75970 2070 aa11.08□□□□□ -0.63
GTF3C1-204ENST00000564664 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 TUBAL3A6NHL2 446 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 A6NNC1 897 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 MYO1GB0I1T2 1018 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 PLOD2O00469 737 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 GLRA3O75311 464 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 TMIGD3P0DMS9 266 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 MYL2P10916 166 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 CHN1P15882 459 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 IL12BP29460 328 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 PCYT1AP49585 367 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 GFRA1P56159 465 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 DNAJB13P59910 316 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 MRPS35P82673 323 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 ZNF763Q0D2J5 394 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 C2orf80Q0P641 193 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 SPDYAQ5MJ70 313 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 TCHHL1Q5QJ38 904 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 ZYG11AQ6WRX3 759 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 IKBIPQ70UQ0 350 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 CAMKMTQ7Z624 323 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 ADGRE4PQ86SQ3 457 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 IFNEQ86WN2 208 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 TRIM42Q8IWZ5 723 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 SIMC1Q8NDZ2 872 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 OR9A2Q8NGT5 310 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 RDH11Q8TC12 318 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 MZB1Q8WU39 189 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 KAT2AQ92830 837 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 ADOQ96SZ5 270 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 CXXC4Q9H2H0 198 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 PIGMQ9H3S5 423 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 GSTO2Q9H4Y5 243 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 FOLH1BQ9HBA9 442 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 GALNT9Q9HCQ5 603 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 MID1IP1Q9NPA3 183 aa11.08□□□□□ -0.64
GTF3C1-204ENST00000564664 SERHLQ9NQF3 203 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms