RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 TSGA13Q96PP4 275 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 XPO6Q96QU8 1125 aaKnown RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 PCDHB18PQ96TA0 734 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 AGPAT1Q99943 283 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 NUP58Q9BVL2 599 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 BBS2Q9BXC9 721 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 SLC2A11Q9BYW1 496 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF350Q9GZX5 532 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 WNT5BQ9H1J7 359 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 IFNKQ9P0W0 207 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 DEC1Q9P2X7 70 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 MMP17Q9ULZ9 603 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CHKBQ9Y259 395 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 GRIP1Q9Y3R0 1128 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CEP250Q9BV73 2442 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 TDRD6O60522 2096 aaKnown RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ANTXRLA6NF34 631 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 NEDD8-MDP1E9PL57 170 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 GRAP2O75791 330 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 MOCS3O95396 460 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 APOEP02649 317 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 CALB1P05937 261 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ACP2P11117 423 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 SLC2A3P11169 496 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 GZMAP12544 262 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ITIH1P19827 911 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 HNRNPH3P31942 346 aaKnown RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 CCR1P32246 355 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 NSFP46459 744 aaKnown RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 CXCL12P48061 93 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 SGSHP51688 502 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 LUMP51884 338 aaPredicted RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 TPD52P55327 224 aaPredicted RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 CDK3Q00526 305 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 KDSRQ06136 332 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ENPP2Q13822 863 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 SLC25A52Q3SY17 297 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 KLHL26Q53HC5 615 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 C2CD6Q53TS8 623 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 MS4A13Q5J8X5 152 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 BRMS1LQ5PSV4 323 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 PPP1R2P3Q6NXS1 205 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 LINGO4Q6UY18 593 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ZBTB49Q6ZSB9 765 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 TPGS1Q6ZTW0 290 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF571Q7Z3V5 609 aaPredicted RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 SIAH3Q8IW03 269 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF683Q8IZ20 524 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 CPSF7Q8N684 471 aaKnown RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF557Q8N988 423 aaPredicted RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 RPLP0P6Q8NHW5 317 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 JOSD2Q8TAC2 188 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 OCC1Q8TAD7 63 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 WFDC5Q8TCV5 224 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 SYN2Q92777 582 aaPredicted RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 SLAMF9Q96A28 289 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 BTN2A3PQ96KV6 586 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 OR6C1Q96RD1 312 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 GAL3ST4Q96RP7 486 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 PRMT1Q99873 361 aaKnown RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 C11orf70Q9BRQ4 267 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 TRIM7Q9C029 511 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 FN3KQ9H479 309 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 HAUS4Q9H6D7 363 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 PIGVQ9NUD9 493 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 DDIT4Q9NX09 232 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 XPO7Q9UIA9 1087 aaKnown RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 CLEC4EQ9ULY5 219 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 STAP1Q9ULZ2 295 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 PCDHGA1Q9Y5H4 931 aa4.34□□□□□ -1.71
LINC00254-201ENST00000563416 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF106Q9H2Y7 1883 aaKnown RBP4.34□□□□□ -1.71
LINC00254-201ENST00000563416 ASCC3Q8N3C0 2202 aaKnown RBP4.34□□□□□ -1.72
LINC00254-201ENST00000563416 GPR179Q6PRD1 2367 aa4.34□□□□□ -1.72
LINC00254-201ENST00000563416 MYLKQ15746 1914 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 IGLV3-10A0A075B6K4 115 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 GOLGA6L7A0A1B0GV03 622 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 SDR42E2A6NKP2 422 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 SIGLEC16A6NMB1 481 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 GOLGA8SH3BPF8 625 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 SGK1O00141 431 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 AP5Z1O43299 807 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 LUC7L3O95232 432 aaKnown RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ADCY5O95622 1261 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 EML2O95834 649 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 GUCA1CO95843 209 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 SERPING1P05155 500 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 TPM3P06753 285 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 CD48P09326 243 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 RAB40ALP0C0E4 278 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 DANCRP0C864 163 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 HLA-FP30511 346 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 TIA1P31483 386 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 RDXP35241 583 aaKnown RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 FRKP42685 505 aaPredicted RBP4.33□□□□□ -1.72
LINC00254-201ENST00000563416 SULT1E1P49888 294 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 ASCL1P50553 236 aa4.33□□□□□ -1.72
LINC00254-201ENST00000563416 HSD17B7P56937 341 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms