RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 GAB1Q13480 694 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 RPS6KA2Q15349 733 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 HYAL4Q2M3T9 481 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 PGS1Q32NB8 556 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 CMPK2Q5EBM0 449 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 PRAMEF20Q5VT98 475 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 FNDC7Q5VTL7 733 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 OR4F3Q6IEY1 312 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 FAM47EQ6ZV65 393 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 NUP54Q7Z3B4 507 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 SPATA19Q7Z5L4 167 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 SLC44A2Q8IWA5 706 aaPredicted RBP7.84□□□□□ -1.15
UBR1-204ENST00000563239 CLECL1Q8IZS7 167 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 SLC34A3Q8N130 599 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 FAM13CQ8NE31 585 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 OR8J2Q8NGG1 315 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 OR52N2Q8NGI0 321 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ZFP28Q8NHY6 868 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 OR5P2Q8WZ92 322 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 TMBIM1Q969X1 311 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 TESCQ96BS2 214 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 FAM120BQ96EK7 910 aaKnown RBP7.84□□□□□ -1.15
UBR1-204ENST00000563239 SLC35A4Q96G79 324 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 C16orf58Q96GQ5 468 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 MAGEB18Q96M61 343 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 SECISBP2Q96T21 854 aaKnown RBP7.84□□□□□ -1.15
UBR1-204ENST00000563239 FAM173AQ9BQD7 235 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 DUSP26Q9BV47 211 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ANGPTL4Q9BY76 406 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 TTTY12Q9BZ98 90 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 CLMPQ9H6B4 373 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ZDHHC11Q9H8X9 412 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 PLSCR2Q9NRY7 297 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 DDX18Q9NVP1 670 aaKnown RBP7.84□□□□□ -1.15
UBR1-204ENST00000563239 CNIH4Q9P003 139 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 NPIPA1Q9UND3 350 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 HRH3Q9Y5N1 445 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 EML6Q6ZMW3 1958 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ITPR3Q14573 2671 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 GXYLT2A0PJZ3 443 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 OR6C70A6NIJ9 312 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 FAM166BA8MTA8 275 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 CAPN14A8MX76 684 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 B4DXG7 233 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 C9JVG2 144 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 TP53I11O14683 189 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 EMC8O43402 210 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 ASNA1O43681 348 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 HS6ST1O60243 411 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 SEMA7AO75326 666 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 NKX2-2O95096 273 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 UNC5CO95185 931 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 TGDSO95455 350 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 IGKV1D-16P01601 117 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 C1QCP02747 245 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 CELA3AP09093 270 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 RNF224P0DH78 156 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 ACP2P11117 423 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 ZNF24P17028 368 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 GPC1P35052 558 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 MAN2A2P49641 1150 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 IDH3AP50213 366 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 GAS1P54826 345 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 NRG3P56975 720 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 PPIAP62937 165 aaKnown RBP7.83□□□□□ -1.16
UBR1-204ENST00000563239 HBA1P69905 142 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 HSF1Q00613 529 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 PLCXD2Q0VAA5 305 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 ZNF155Q12901 538 aaPredicted RBP7.83□□□□□ -1.16
UBR1-204ENST00000563239 LSM12Q3MHD2 195 aaKnown RBP7.83□□□□□ -1.16
UBR1-204ENST00000563239 CYP27C1Q4G0S4 372 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 SPANXN4Q5MJ08 99 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 MFSD12Q6NUT3 480 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 TMEM81Q6P7N7 255 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 GFRALQ6UXV0 394 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 TMEM251Q8N6I4 163 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 NATD1Q8N6N6 113 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 FAM98AQ8NCA5 519 aaKnown RBP7.83□□□□□ -1.16
UBR1-204ENST00000563239 SLC16A11Q8NCK7 471 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 NUP43Q8NFH3 380 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 FAM110BQ8TC76 370 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 DYDC1Q8WWB3 177 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 DIO2Q92813 273 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 MARK4Q96L34 752 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 COL21A1Q96P44 957 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 ADOQ96SZ5 270 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 PRPF18Q99633 342 aaKnown RBP7.83□□□□□ -1.16
UBR1-204ENST00000563239 EBF4Q9BQW3 602 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 DPY30Q9C005 99 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 IL1RL2Q9HB29 575 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 EQTNQ9NQ60 294 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 ATAD3AQ9NVI7 634 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 GPATCH2Q9NW75 528 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 FLRT3Q9NZU0 649 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 SEC14L3Q9UDX4 400 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 OSGIN2Q9Y236 505 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 ZNF835Q9Y2P0 537 aa7.83□□□□□ -1.16
UBR1-204ENST00000563239 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.83□□□□□ -1.16
UBR1-204ENST00000563239 PRSS51A0A1B0GVH4 220 aa7.82□□□□□ -1.16
UBR1-204ENST00000563239 C17orf51A8MQB3 221 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms