RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CHRNA3P32297 505 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 ASMTP46597 345 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 ZP4Q12836 540 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 RUNX3Q13761 415 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 PRR5LQ6MZQ0 368 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 PNCKQ6P2M8 343 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 ZNF562Q6V9R5 426 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 P2RY8Q86VZ1 359 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 APOL2Q9BQE5 337 aa4.26□□□□□ -1.73
LINC00557-201ENST00000563184 FBLL1A6NHQ2 334 aaKnown RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 CCT8L1PA6NM43 557 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 H0YL77 283 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 HERVK_113P63132 956 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 ERVK-8P63133 956 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 NOP14P78316 857 aaKnown RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 MRPS6P82932 125 aaKnown RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 SRYQ05066 204 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 BNIP1Q12981 228 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 ZIC1Q15915 447 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 PPP1R3AQ16821 1122 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 Q1RN00 199 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 SLC25A30Q5SVS4 291 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 DMKNQ6E0U4 476 aaPredicted RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 RAET1GQ6H3X3 334 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 HACD2Q6Y1H2 254 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 POGZQ7Z3K3 1410 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 TSEN54Q7Z6J9 526 aaKnown RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 SYVN1Q86TM6 617 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 SERINC5Q86VE9 423 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 CENPSQ8N2Z9 138 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 NFAM1Q8NET5 270 aaPredicted RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 FCGR1BQ92637 280 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 DNAJA3Q96EY1 480 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 ZBED6CLQ96FA7 236 aaPredicted RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 ERVK-6Q9BXR3 956 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 DCAF13Q9NV06 445 aaKnown RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 PRODH2Q9UF12 536 aa4.25□□□□□ -1.73
LINC00557-201ENST00000563184 HOOK1Q9UJC3 728 aaKnown RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 TP53BP1Q12888 1972 aaPredicted RBP4.25□□□□□ -1.73
LINC00557-201ENST00000563184 ABCC4O15439 1325 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 ZSCAN5CA6NGD5 496 aaPredicted RBP4.24□□□□□ -1.73
LINC00557-201ENST00000563184 NPIPA2E9PIF3 369 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 PDXKO00764 312 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 SLC35G4P0C7Q5 338 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 GHRP10912 638 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 CD86P42081 329 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 RFTN1Q14699 578 aaPredicted RBP4.24□□□□□ -1.73
LINC00557-201ENST00000563184 CCDC92Q53HC0 331 aaPredicted RBP4.24□□□□□ -1.73
LINC00557-201ENST00000563184 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 P4HA3Q7Z4N8 544 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 NET1Q7Z628 596 aaPredicted RBP4.24□□□□□ -1.73
LINC00557-201ENST00000563184 ZSCAN30Q86W11 494 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 HSCBQ8IWL3 235 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 BCORP1Q8N888 145 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 OR52B4Q8NGK2 314 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 ADIPOR1Q96A54 375 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 PNNQ9H307 717 aaKnown RBP4.24□□□□□ -1.73
LINC00557-201ENST00000563184 ACTR8Q9H981 624 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 CUTCQ9NTM9 273 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 GDAP2Q9NXN4 497 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 ACTR3BQ9P1U1 418 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 ZNF107Q9UII5 783 aaPredicted RBP4.24□□□□□ -1.73
LINC00557-201ENST00000563184 DHRS7Q9Y394 339 aa4.24□□□□□ -1.73
LINC00557-201ENST00000563184 TTC26A0AVF1 554 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 C11orf98E9PRG8 122 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 LGALS8O00214 317 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 ALOX15BO15296 676 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 TSC22D2O75157 780 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 RHBDL1O75783 438 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 APBB3O95704 486 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 LAMP1P11279 417 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 TSPAN8P19075 237 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 OR1D4P47884 311 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 HTR5AP47898 357 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 RPL34P49207 117 aaKnown RBP4.23□□□□□ -1.73
LINC00557-201ENST00000563184 GMFBP60983 142 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 PPIAP62937 165 aaKnown RBP4.23□□□□□ -1.73
LINC00557-201ENST00000563184 PAX2Q02962 417 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 EIF2B1Q14232 305 aaKnown RBP4.23□□□□□ -1.73
LINC00557-201ENST00000563184 MICAQ29983 383 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 ADPRMQ3LIE5 342 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 TIMM50Q3ZCQ8 353 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 BEND6Q5SZJ8 279 aaPredicted RBP4.23□□□□□ -1.73
LINC00557-201ENST00000563184 UNC5DQ6UXZ4 953 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 Q6ZR54 194 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 CERS5Q8N5B7 392 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 LINC00612Q8N6U2 182 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 RFESDQ8TAC1 157 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 C9orf85Q96MD7 179 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 YAE1D1Q9NRH1 226 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 FAM120CQ9NX05 1096 aaKnown RBP4.23□□□□□ -1.73
LINC00557-201ENST00000563184 FOXJ3Q9UPW0 622 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 NTNG1Q9Y2I2 539 aa4.23□□□□□ -1.73
LINC00557-201ENST00000563184 H3BTX0 84 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 LANCL1O43813 399 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 ARF4P18085 180 aaPredicted RBP4.22□□□□□ -1.73
LINC00557-201ENST00000563184 IDSP22304 550 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 CCND2P30279 289 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 STK19P49842 368 aaPredicted RBP4.22□□□□□ -1.73
LINC00557-201ENST00000563184 ARHGDIBP52566 201 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms