RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ACAD11Q709F0 780 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 LIX1LQ8IVB5 337 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 ULK2Q8IYT8 1036 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 CCDC116Q8IYX3 515 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 OR9A2Q8NGT5 310 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 CDC26Q8NHZ8 85 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 ZNF675Q8TD23 568 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 EXOSC8Q96B26 276 aaKnown RBP14.6□□□□□ -0.07
LMX1B-204ENST00000561065 OMA1Q96E52 524 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 HSPBAP1Q96EW2 488 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 PPP3R2Q96LZ3 170 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 TAS2R9Q9NYW1 312 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 C15orf41Q9Y2V0 281 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 FIS1Q9Y3D6 152 aa14.6□□□□□ -0.07
LMX1B-204ENST00000561065 ENO4A6NNW6 628 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 UGT2B11O75310 529 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 HSPA4LO95757 839 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 PTPN6P29350 595 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 RPL3P39023 403 aaKnown RBP14.59□□□□□ -0.07
LMX1B-204ENST00000561065 CDK9P50750 372 aaKnown RBP14.59□□□□□ -0.07
LMX1B-204ENST00000561065 WNT3P56703 355 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 MRPS22P82650 360 aaKnown RBP14.59□□□□□ -0.07
LMX1B-204ENST00000561065 CEBPEQ15744 281 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 SH2D4BQ5SQS7 431 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 DCST1Q5T197 706 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 KANK2Q63ZY3 851 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 NPSR1Q6W5P4 371 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 R3HCC1LQ7Z5L2 792 aaKnown RBP14.59□□□□□ -0.07
LMX1B-204ENST00000561065 EXOC3L1Q86VI1 746 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 FAM9CQ8IZT9 166 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 NATD1Q8N6N6 113 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 KAT2AQ92830 837 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 C14orf79Q96F83 325 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 TMEM41AQ96HV5 264 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 LCORQ96JN0 433 aaPredicted RBP14.59□□□□□ -0.07
LMX1B-204ENST00000561065 GNRHR2Q96P88 292 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 ZIM3Q96PE6 472 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 PRPF18Q99633 342 aaKnown RBP14.59□□□□□ -0.07
LMX1B-204ENST00000561065 GALNT9Q9HCQ5 603 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 B4GALT7Q9UBV7 327 aa14.59□□□□□ -0.07
LMX1B-204ENST00000561065 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.59□□□□□ -0.07
LMX1B-204ENST00000561065 CCDC168Q8NDH2 2452 aa14.58□□□□□ -0.07
LMX1B-204ENST00000561065 ANKRD17O75179 2603 aaKnown RBP14.58□□□□□ -0.08
LMX1B-204ENST00000561065 GNB5O14775 395 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 SNX4O95219 450 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 HPNP05981 417 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 LINC00032P0C843 101 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 DRD5P21918 477 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 KRT20P35900 424 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 PPICP45877 212 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 SERPINB4P48594 390 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 PLCXD2Q0VAA5 305 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 MAD2L1Q13257 205 aaPredicted RBP14.58□□□□□ -0.08
LMX1B-204ENST00000561065 ATP6AP1LQ52LC2 224 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 EIPR1Q53HC9 387 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 HHATQ5VTY9 493 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 TMEM198Q66K66 360 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 TMEM81Q6P7N7 255 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 NUP54Q7Z3B4 507 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 PACS2Q86VP3 889 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 NAXEQ8NCW5 288 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 ZFP28Q8NHY6 868 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 TWIST2Q8WVJ9 160 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 DOCK7Q96N67 2140 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 ALKBH4Q9NXW9 302 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 MAPRE3Q9UPY8 281 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 EXO1Q9UQ84 846 aaKnown RBP14.58□□□□□ -0.08
LMX1B-204ENST00000561065 SLC6A5Q9Y345 797 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 POLR3HQ9Y535 204 aaPredicted RBP14.58□□□□□ -0.08
LMX1B-204ENST00000561065 DNAJC15Q9Y5T4 150 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 PTGDR2Q9Y5Y4 395 aa14.58□□□□□ -0.08
LMX1B-204ENST00000561065 TEP1Q99973 2627 aaKnown RBP14.57□□□□□ -0.08
LMX1B-204ENST00000561065 C15orf38-AP3S2A0A0A6YYH1 394 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 C2orf72A6NCS6 295 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 FRG2CA6NGY1 282 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 TTC36A6NLP5 189 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 B4DXG7 233 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 SNPHO15079 494 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 TO15178 435 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 PLOD3O60568 738 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 COQ9O75208 318 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 SERPINE1P05121 402 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 CT45A8P0DMV1 189 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 CT45A9P0DMV2 189 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 SSTR2P30874 369 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 MASP1P48740 699 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 CORO7P57737 925 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 TLE4Q04727 773 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 ACSF3Q4G176 576 aaPredicted RBP14.57□□□□□ -0.08
LMX1B-204ENST00000561065 CT45A2Q5DJT8 189 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 FAM71E1Q6IPT2 247 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 ANGPTL8Q6UXH0 198 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 LIX1Q8N485 282 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 OR7G2Q8NG99 324 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 OR10Q1Q8NGQ4 319 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.57□□□□□ -0.08
LMX1B-204ENST00000561065 TMBIM1Q969X1 311 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 MTERF3Q96E29 417 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 VSTM2LQ96N03 204 aa14.57□□□□□ -0.08
LMX1B-204ENST00000561065 BTBD9Q96Q07 612 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms