RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 TREX2Q9BQ50 279 aaPredicted RBP9.91□□□□□ -0.82
CRTC3-209ENST00000560320 OSBPL10Q9BXB5 764 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 ARMC7Q9H6L4 198 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 ANKRA2Q9H9E1 313 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 NECTIN3Q9NQS3 549 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 LANCL2Q9NS86 450 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 SIDT1Q9NXL6 827 aaKnown RBP9.91□□□□□ -0.82
CRTC3-209ENST00000560320 KLHL28Q9NXS3 571 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 IFT80Q9P2H3 777 aaPredicted RBP9.91□□□□□ -0.82
CRTC3-209ENST00000560320 PRODH2Q9UF12 536 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 GPN3Q9UHW5 284 aaPredicted RBP9.91□□□□□ -0.82
CRTC3-209ENST00000560320 SLC9A8Q9Y2E8 581 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 PADI2Q9Y2J8 665 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 IFT52Q9Y366 437 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 TMEM184BQ9Y519 407 aaPredicted RBP9.91□□□□□ -0.82
CRTC3-209ENST00000560320 GPC6Q9Y625 555 aaPredicted RBP9.91□□□□□ -0.82
CRTC3-209ENST00000560320 CLCA3PQ9Y6N3 262 aa9.91□□□□□ -0.82
CRTC3-209ENST00000560320 A8MVJ9 347 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 C17orf105B2RV13 164 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 CASC3O15234 703 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 FOXD2O60548 495 aaPredicted RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 DPM1O60762 260 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 CPNE3O75131 537 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 STX11O75558 287 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 JRKO75564 520 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 GCM2O75603 506 aaPredicted RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 RFPL3O75679 317 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 PRSS23O95084 383 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 MFN2O95140 757 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 KLK3P07288 261 aaPredicted RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 FESP07332 822 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 CHRM4P08173 479 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 CT62P0C5K7 136 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 CD59P13987 128 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 FPR1P21462 350 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 DNAJA1P31689 397 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 IFNA8P32881 189 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 GABRA3P34903 492 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 KCNJ5P48544 419 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 SMIM11AP58511 58 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 VLDLRP98155 873 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 MC2RQ01718 297 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 ZFP36L1Q07352 338 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 SPEM2Q0P670 501 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 MGAT2Q10469 447 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 EPS8Q12929 822 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 MED21Q13503 144 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 GK3PQ14409 553 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 LARS2Q15031 903 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 NRF1Q16656 503 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 DUSP5Q16690 384 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 EIPR1Q53HC9 387 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 CCDC157Q569K6 752 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 DCST2Q5T1A1 773 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 HEPHL1Q6MZM0 1159 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 PWWP2BQ6NUJ5 590 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 LURAP1LQ8IV03 231 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 SLC16A11Q8NCK7 471 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 DOK4Q8TEW6 326 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 METTL21AQ8WXB1 218 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 PMM1Q92871 262 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 DAZLQ92904 295 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 FKBP10Q96AY3 582 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 NRBF2Q96F24 287 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 ZNF354BQ96LW1 612 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 CMKLR1Q99788 373 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 RBM4BQ9BQ04 359 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 RBM4Q9BWF3 364 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 OSBPL11Q9BXB4 747 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 PINK1Q9BXM7 581 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 MTHFD2LQ9H903 347 aaPredicted RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 FOLH1BQ9HBA9 442 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 Q9N2J8 555 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 POLE3Q9NRF9 147 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 THSD1Q9NS62 852 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 OCIAD1Q9NX40 245 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 SLC39A1Q9NY26 324 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 MKL2Q9ULH7 1088 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 SATB2Q9UPW6 733 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 ERVK-19Q9WJR5 959 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 SH3GLB1Q9Y371 365 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 SAMHD1Q9Y3Z3 626 aaKnown RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 WDR45Q9Y484 360 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 PCDHGA8Q9Y5G5 932 aa9.9□□□□□ -0.82
CRTC3-209ENST00000560320 HEMK1Q9Y5R4 338 aaPredicted RBP9.9□□□□□ -0.82
CRTC3-209ENST00000560320 LAMA5O15230 3695 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 TGFBR3LH3BV60 316 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 PDLIM1O00151 329 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 SOCS2O14508 198 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 CDX4O14627 284 aaPredicted RBP9.89□□□□□ -0.83
CRTC3-209ENST00000560320 EI24O14681 340 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 CBX7O95931 251 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 HPRP00739 348 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 HEXBP07686 556 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 ZNF26P17031 533 aaPredicted RBP9.89□□□□□ -0.83
CRTC3-209ENST00000560320 RHCEP18577 417 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 CDH2P19022 906 aaPredicted RBP9.89□□□□□ -0.83
CRTC3-209ENST00000560320 CD247P20963 164 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 CCKBRP32239 447 aa9.89□□□□□ -0.83
CRTC3-209ENST00000560320 RORAP35398 523 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms