RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 ACVR2AP27037 513 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 CHRNB4P30926 498 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 NUP107P57740 925 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 PRSS53Q2L4Q9 553 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 IL23RQ5VWK5 629 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 FAM111BQ6SJ93 734 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 ACAD11Q709F0 780 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 ZNF295-AS1Q8N0V1 137 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 DIO2Q92813 273 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 JSRP1Q96MG2 331 aaPredicted RBP21.32■■□□□ 1
CRNDE-209ENST00000560208 ZNF681Q96N22 645 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 BBS4Q96RK4 519 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 SPOCK3Q9BQ16 436 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 DOHHQ9BU89 302 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 ZNF703Q9H7S9 590 aaPredicted RBP21.32■■□□□ 1
CRNDE-209ENST00000560208 AKTIPQ9H8T0 292 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 EHD3Q9NZN3 535 aa21.32■■□□□ 1
CRNDE-209ENST00000560208 EXO1Q9UQ84 846 aaKnown RBP21.32■■□□□ 1
CRNDE-209ENST00000560208 LRRC3CA6NJW4 275 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 KLF11O14901 512 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 HCN1O60741 890 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 NRG3P56975 720 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 FBXW4P57775 412 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 RPS6KA2Q15349 733 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 PRICKLE4Q2TBC4 344 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 HSP90B2PQ58FF3 399 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 CCDC71Q8IV32 467 aaPredicted RBP21.31■■□□□ 1
CRNDE-209ENST00000560208 VWA5B2Q8N398 1253 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 LILRB4Q8NHJ6 448 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 SARAFQ96BY9 339 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 ENKD1Q9H0I2 346 aa21.31■■□□□ 1
CRNDE-209ENST00000560208 EIF3LQ9Y262 564 aaKnown RBP21.31■■□□□ 1
CRNDE-209ENST00000560208 WBP11Q9Y2W2 641 aaKnown RBP21.31■■□□□ 1
CRNDE-209ENST00000560208 ARHGAP21Q5T5U3 1957 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 ANKRD33BA6NCL7 494 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 ATP1B1P05026 303 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 TMED10P49755 219 aaKnown RBP21.3■■□□□ 1
CRNDE-209ENST00000560208 MGAT2Q10469 447 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 MAP4K2Q12851 820 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 TBCELQ5QJ74 424 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 WLSQ5T9L3 541 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 WDR75Q8IWA0 830 aaKnown RBP21.3■■□□□ 1
CRNDE-209ENST00000560208 OR9A2Q8NGT5 310 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 REEP4Q9H6H4 257 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 MEAF6Q9HAF1 191 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 QPCTLQ9NXS2 382 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 MAT2BQ9NZL9 334 aa21.3■■□□□ 1
CRNDE-209ENST00000560208 OTOGQ6ZRI0 2925 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 GOLGA8QA0A0J9YX86 632 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 GOLGA8OA6NCC3 632 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 FAM90A27PA6NNH2 459 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 GOLGA8NF8WBI6 632 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 HDAC3O15379 428 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 GPX3P22352 226 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 NTSP30990 170 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 ASMTP46597 345 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 NCBP2P52298 156 aaKnown RBP eCLIP21.29■■□□□ 1
CRNDE-209ENST00000560208 MRPS35P82673 323 aaKnown RBP21.29■■□□□ 1
CRNDE-209ENST00000560208 MAD2L1Q13257 205 aaPredicted RBP21.29■■□□□ 1
CRNDE-209ENST00000560208 PTGR1Q14914 329 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 TMEM198Q66K66 360 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 B3GNT6Q6ZMB0 384 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 MEX3BQ6ZN04 569 aaKnown RBP21.29■■□□□ 1
CRNDE-209ENST00000560208 PRR22Q8IZ63 422 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 SAMD14Q8IZD0 417 aaPredicted RBP21.29■■□□□ 1
CRNDE-209ENST00000560208 C17orf47Q8NEP4 570 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 OR10Q1Q8NGQ4 319 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 SPPL2AQ8TCT8 520 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 KAT2AQ92830 837 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 PPCDCQ96CD2 204 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 ZNF597Q96LX8 424 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 UCK2Q9BZX2 261 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 NXF5Q9H1B4 397 aaKnown RBP21.29■■□□□ 1
CRNDE-209ENST00000560208 ACKR4Q9NPB9 350 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 SLCO1B3Q9NPD5 702 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 SH3BP4Q9P0V3 963 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 SPRR3Q9UBC9 169 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 B4GALT7Q9UBV7 327 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 BCAP29Q9UHQ4 241 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 DTX4Q9Y2E6 619 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 FAM215AQ9Y5M1 114 aa21.29■■□□□ 1
CRNDE-209ENST00000560208 POLQO75417 2590 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 WDR1O75083 606 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 TRIM3O75382 744 aaPredicted RBP21.28■■□□□ 1
CRNDE-209ENST00000560208 G6PDP11413 515 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 PRPS2P11908 318 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 PCSK2P16519 638 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 ENDOUP21128 410 aaKnown RBP21.28■■□□□ 1
CRNDE-209ENST00000560208 ABCD3P28288 659 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 SSTR2P30874 369 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 EMX2Q04743 252 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 EXOSC7Q15024 291 aaKnown RBP21.28■■□□□ 1
CRNDE-209ENST00000560208 BICRALQ6AI39 1079 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 RTL6Q6ICC9 239 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 FAM9CQ8IZT9 166 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 ACBD4Q8NC06 268 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 PIWIL2Q8TC59 973 aaKnown RBP21.28■■□□□ 1
CRNDE-209ENST00000560208 CKAP2Q8WWK9 683 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 LURAP1Q96LR2 239 aa21.28■■□□□ 1
CRNDE-209ENST00000560208 SECISBP2Q96T21 854 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms