RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 NUP43Q8NFH3 380 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 OR5AK3PQ8NH89 298 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 PRR7Q8TB68 274 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 ACTRT2Q8TDY3 377 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 DIO2Q92813 273 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 EFHD2Q96C19 240 aaPredicted RBP17.17■□□□□ 0.34
CASC4-209ENST00000559222 GPR137Q96N19 417 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 FAM173AQ9BQD7 235 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 YIPF4Q9BSR8 244 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 BHLHE41Q9C0J9 482 aaPredicted RBP17.17■□□□□ 0.34
CASC4-209ENST00000559222 CLMPQ9H6B4 373 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 NTMQ9P121 344 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 LIPGQ9Y5X9 500 aa17.17■□□□□ 0.34
CASC4-209ENST00000559222 C2orf72A6NCS6 295 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 ACOX3O15254 700 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 TSPAN2O60636 221 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 SCN2BO60939 215 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 GLSO94925 669 aaPredicted RBP17.16■□□□□ 0.34
CASC4-209ENST00000559222 IGKV1D-16P01601 117 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 CELA3AP09093 270 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 IFI6P09912 130 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 FREM3P0C091 2139 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 RFPL3SP0C7P2 107 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 RNF224P0DH78 156 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 MAP3K8P41279 467 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 ZFP36L2P47974 494 aaKnown RBP17.16■□□□□ 0.34
CASC4-209ENST00000559222 IDH3AP50213 366 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 DGKQP52824 942 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 DCAF7P61962 342 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 HBA1P69905 142 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 GAB1Q13480 694 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 GFRALQ6UXV0 394 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 SPATA19Q7Z5L4 167 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 GALNT10Q86SR1 603 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 OR5P2Q8WZ92 322 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 PIK3R3Q92569 461 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 NTNG2Q96CW9 530 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 LMF2Q9BU23 707 aaKnown RBP17.16■□□□□ 0.34
CASC4-209ENST00000559222 GALNT9Q9HCQ5 603 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 ATAD3AQ9NVI7 634 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 SEC14L3Q9UDX4 400 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 SNX8Q9Y5X2 465 aa17.16■□□□□ 0.34
CASC4-209ENST00000559222 TFECO14948 347 aaPredicted RBP17.15■□□□□ 0.34
CASC4-209ENST00000559222 EMC8O43402 210 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 SEMA7AO75326 666 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 REM1O75628 298 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 MAGEA5P43359 124 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 PLGLB1Q02325 96 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 FAM174BQ3ZCQ3 159 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 EXOSC6Q5RKV6 272 aaKnown RBP17.15■□□□□ 0.34
CASC4-209ENST00000559222 FNDC7Q5VTL7 733 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 MFSD12Q6NUT3 480 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 RGS9BPQ6ZS82 235 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 DND1Q8IYX4 353 aaKnown RBP17.15■□□□□ 0.34
CASC4-209ENST00000559222 TMEM251Q8N6I4 163 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 OR9I1Q8NGQ6 314 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 RFWD2Q8NHY2 731 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 PSMA8Q8TAA3 256 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 HOXB13Q92826 284 aaPredicted RBP17.15■□□□□ 0.34
CASC4-209ENST00000559222 TESCQ96BS2 214 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 RILPQ96NA2 401 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 MS4A4EQ96PG1 132 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 ADOQ96SZ5 270 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 DEFB127Q9H1M4 99 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 ZCCHC3Q9NUD5 404 aaKnown RBP17.15■□□□□ 0.34
CASC4-209ENST00000559222 OSGIN2Q9Y236 505 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.15■□□□□ 0.34
CASC4-209ENST00000559222 MYO18BQ8IUG5 2567 aa17.15■□□□□ 0.34
CASC4-209ENST00000559222 CLEC18AA5D8T8 446 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 B4DXG7 233 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 E9PBE3 544 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 ADAM10O14672 748 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 TRIM3O75382 744 aaPredicted RBP17.14■□□□□ 0.33
CASC4-209ENST00000559222 PDE9AO76083 593 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 CYP4B1P13584 511 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 CD1EP15812 388 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 GABRA3P34903 492 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 SOAT1P35610 550 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 CASP3P42574 277 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 TMED10P49755 219 aaKnown RBP17.14■□□□□ 0.33
CASC4-209ENST00000559222 AQP5P55064 265 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 PPIAP62937 165 aaKnown RBP17.14■□□□□ 0.33
CASC4-209ENST00000559222 KCNJ2P63252 427 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 DUSP5Q16690 384 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 CLEC18BQ6UXF7 455 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 GK5Q6ZS86 529 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 ZAR1Q86SH2 424 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 POGLUT1Q8NBL1 392 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 CLEC18CQ8NCF0 446 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 SLC16A11Q8NCK7 471 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 OR8J2Q8NGG1 315 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 SLC35A4Q96G79 324 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 JSRP1Q96MG2 331 aaPredicted RBP17.14■□□□□ 0.33
CASC4-209ENST00000559222 COL21A1Q96P44 957 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 PRPF18Q99633 342 aaKnown RBP17.14■□□□□ 0.33
CASC4-209ENST00000559222 DOHHQ9BU89 302 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 ANGPTL4Q9BY76 406 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 SERHL2Q9H4I8 314 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 CNIH4Q9P003 139 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 OR10H1Q9Y4A9 318 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms