RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NFATC3Q12968 1075 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 SELPLGQ14242 412 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 MAPK11Q15759 364 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 LRIF1Q5T3J3 769 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 CCNJQ5T5M9 372 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 C6orf163Q5TEZ5 329 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 ANXA8L1Q5VT79 327 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 IL20RBQ6UXL0 311 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 DLEU7Q6UYE1 221 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 C6orf120Q7Z4R8 191 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 MTDHQ86UE4 582 aaKnown RBP10.03□□□□□ -0.8
TPM1-217ENST00000559108 SLC44A2Q8IWA5 706 aaPredicted RBP10.03□□□□□ -0.8
TPM1-217ENST00000559108 POU5F2Q8N7G0 328 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 C7orf57Q8NEG2 295 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 C17orf47Q8NEP4 570 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 OR5L2Q8NGL0 311 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 OR5M3Q8NGP4 307 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 SFXN5Q8TD22 340 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 ZFP90Q8TF47 636 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 CDS1Q92903 461 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 RAB8BQ92930 207 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 TP53INP1Q96A56 240 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 EFHD2Q96C19 240 aaPredicted RBP10.03□□□□□ -0.8
TPM1-217ENST00000559108 SPACA9Q96E40 222 aaPredicted RBP10.03□□□□□ -0.8
TPM1-217ENST00000559108 OMA1Q96E52 524 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 SLC35A4Q96G79 324 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 SCMH1Q96GD3 660 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 LCORQ96JN0 433 aaPredicted RBP10.03□□□□□ -0.8
TPM1-217ENST00000559108 PANX1Q96RD7 426 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 NODALQ96S42 347 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 ZBTB18Q99592 522 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 UTP23Q9BRU9 249 aaKnown RBP10.03□□□□□ -0.8
TPM1-217ENST00000559108 SLC35A5Q9BS91 424 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 NEUROD4Q9HD90 331 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 KLHL1Q9NR64 748 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.03□□□□□ -0.8
TPM1-217ENST00000559108 LRFN1Q9P244 771 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 MAPRE3Q9UPY8 281 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
TPM1-217ENST00000559108 CHCHD2Q9Y6H1 151 aaPredicted RBP10.03□□□□□ -0.8
TPM1-217ENST00000559108 CENPVL1A0A0U1RR11 272 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 A0A1W2PP18 115 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 COQ9O75208 318 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 PPM1BO75688 479 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 FREM3P0C091 2139 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 UQCRC2P22695 453 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 GABRA3P34903 492 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 GPR85P60893 370 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 AP2B1P63010 937 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 OC90Q02509 493 aaPredicted RBP10.02□□□□□ -0.81
TPM1-217ENST00000559108 INPP5JQ15735 1006 aaPredicted RBP10.02□□□□□ -0.81
TPM1-217ENST00000559108 NTRK2Q16620 822 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 RNFT1Q5M7Z0 435 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 PRAMEF20Q5VT98 475 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 FIGNL1Q6PIW4 674 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 MSANTD1Q6ZTZ1 278 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 CPLX4Q7Z7G2 160 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 SNX32Q86XE0 403 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 RNF130Q86XS8 419 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 CYP4Z2PQ8N1L4 340 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 ZNF843Q8N446 348 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 NATD1Q8N6N6 113 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 HORMAD2Q8N7B1 307 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 BCORP1Q8N888 145 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 OR56A1Q8NGH5 318 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 RNF138Q8WVD3 245 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 ASB15Q8WXK1 588 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 NEURL3Q96EH8 262 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 PHF12Q96QT6 1004 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 OR7D2Q96RA2 312 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 KLHDC3Q9BQ90 382 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 SLC39A3Q9BRY0 314 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 VAPAQ9P0L0 249 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 PRODH2Q9UF12 536 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 CNOT11Q9UKZ1 510 aaKnown RBP10.02□□□□□ -0.81
TPM1-217ENST00000559108 TRIM33Q9UPN9 1127 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 PCDHB14Q9Y5E9 798 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 PCDHGB7Q9Y5F8 929 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 NPFFR2Q9Y5X5 522 aa10.02□□□□□ -0.81
TPM1-217ENST00000559108 A0A096LPI6 279 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 NPIPA5A0A0B4J1W7 369 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 CAPN14A8MX76 684 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 NPIPA7E9PJI5 369 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 RFXANKO14593 260 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 NME2P1O60361 137 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 DPM1O60762 260 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 SLC25A12O75746 678 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 BCAS2O75934 225 aaPredicted RBP10.01□□□□□ -0.81
TPM1-217ENST00000559108 KCNK2O95069 426 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 UNC5CO95185 931 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 FAM107AO95990 144 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 NUDT7P0C024 238 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 ZCCHC18P0CG32 403 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 NPIPA8P0DM63 369 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 CYP4B1P13584 511 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 NME2P22392 152 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 PIGAP37287 484 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 RFC3P40938 356 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 DNASE1L1P49184 302 aa10.01□□□□□ -0.81
TPM1-217ENST00000559108 CYB561P49447 251 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms