RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 PLCXD2Q0VAA5 305 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 HSPB3Q12988 150 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 STX3Q13277 289 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 SLC10A1Q14973 349 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 PDCD2Q16342 344 aaPredicted RBP10.75□□□□□ -0.69
SHF-204ENST00000558685 ATP6AP1LQ52LC2 224 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 ARHGAP11AQ6P4F7 1023 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 TMEM81Q6P7N7 255 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 MAMDC2Q7Z304 686 aaPredicted RBP10.75□□□□□ -0.69
SHF-204ENST00000558685 NUP54Q7Z3B4 507 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 SLC44A2Q8IWA5 706 aaPredicted RBP10.75□□□□□ -0.69
SHF-204ENST00000558685 SLC34A3Q8N130 599 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 RPRMLQ8N4K4 120 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 MARVELD2Q8N4S9 558 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 FNDC5Q8NAU1 212 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 MGARPQ8TDB4 240 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 RNF138Q8WVD3 245 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 HOXB13Q92826 284 aaPredicted RBP10.75□□□□□ -0.69
SHF-204ENST00000558685 TUBGCP3Q96CW5 907 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 MTERF3Q96E29 417 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 SLC35A4Q96G79 324 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 PPP1R36Q96LQ0 422 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 JSRP1Q96MG2 331 aaPredicted RBP10.75□□□□□ -0.69
SHF-204ENST00000558685 GNRHR2Q96P88 292 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 PAIP2Q9BPZ3 127 aaKnown RBP10.75□□□□□ -0.69
SHF-204ENST00000558685 UBQLN3Q9H347 655 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 AKTIPQ9H8T0 292 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 GALNT9Q9HCQ5 603 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 SH3BP4Q9P0V3 963 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 NTMQ9P121 344 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 SPRR3Q9UBC9 169 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 BOKQ9UMX3 212 aaPredicted RBP10.75□□□□□ -0.69
SHF-204ENST00000558685 ITPR2Q14571 2701 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 NBPF19A0A087WUL8 3843 aa10.75□□□□□ -0.69
SHF-204ENST00000558685 NUP214P35658 2090 aaPredicted RBP10.74□□□□□ -0.69
SHF-204ENST00000558685 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 C2orf72A6NCS6 295 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 OR6C70A6NIJ9 312 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 NPIPA2E9PIF3 369 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 NPIPA3F8WFD2 350 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 ICOSLGO75144 302 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 SNNO75324 88 aaPredicted RBP10.74□□□□□ -0.69
SHF-204ENST00000558685 REM1O75628 298 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 SLITRK5O94991 958 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 SNX4O95219 450 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 IFI6P09912 130 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 G6PDP11413 515 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 DIO3P55073 304 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 PER3P56645 1201 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 EMX2Q04743 252 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 GAB1Q13480 694 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 GXYLT1Q4G148 440 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 TBCELQ5QJ74 424 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 EXOSC6Q5RKV6 272 aaKnown RBP10.74□□□□□ -0.69
SHF-204ENST00000558685 HHATQ5VTY9 493 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 CD163Q86VB7 1156 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 COQ8BQ96D53 544 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 GIMAP5Q96F15 307 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 COL21A1Q96P44 957 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 ADOQ96SZ5 270 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 LMF2Q9BU23 707 aaKnown RBP10.74□□□□□ -0.69
SHF-204ENST00000558685 SLC6A15Q9H2J7 730 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 ACKR4Q9NPB9 350 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 SIRT3Q9NTG7 399 aaPredicted RBP10.74□□□□□ -0.69
SHF-204ENST00000558685 ACSS1Q9NUB1 689 aaPredicted RBP10.74□□□□□ -0.69
SHF-204ENST00000558685 DDX18Q9NVP1 670 aaKnown RBP10.74□□□□□ -0.69
SHF-204ENST00000558685 ASIC5Q9NY37 505 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 TAS2R9Q9NYW1 312 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 FLRT3Q9NZU0 649 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 CELSR2Q9HCU4 2923 aa10.74□□□□□ -0.69
SHF-204ENST00000558685 GXYLT2A0PJZ3 443 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 C17orf51A8MQB3 221 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 E9PLN8 166 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 AQP7O14520 342 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 PRRG2O14669 202 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 ANKRD28O15084 1053 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 SUSD5O60279 629 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 COQ9O75208 318 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 IGKV1D-16P01601 117 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 TPOP07202 933 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 PRPS2P11908 318 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 H2AFXP16104 143 aaPredicted RBP10.73□□□□□ -0.69
SHF-204ENST00000558685 MAPK1P28482 360 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 PTPN6P29350 595 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 GAS1P54826 345 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 MANFP55145 182 aaKnown RBP10.73□□□□□ -0.69
SHF-204ENST00000558685 CASP6P55212 293 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 C21orf58P58505 322 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 ZNF155Q12901 538 aaPredicted RBP10.73□□□□□ -0.69
SHF-204ENST00000558685 AGBL2Q5U5Z8 902 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 TMEM198Q66K66 360 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 TIGD3Q6B0B8 471 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 LARP4Q71RC2 724 aaKnown RBP eCLIP10.73□□□□□ -0.69
SHF-204ENST00000558685 R3HCC1LQ7Z5L2 792 aaKnown RBP10.73□□□□□ -0.69
SHF-204ENST00000558685 MRGPRGQ86SM5 289 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 WDSUB1Q8N9V3 476 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 EFHD2Q96C19 240 aaPredicted RBP10.73□□□□□ -0.69
SHF-204ENST00000558685 ZBED6CLQ96FA7 236 aaPredicted RBP10.73□□□□□ -0.69
SHF-204ENST00000558685 C16orf58Q96GQ5 468 aa10.73□□□□□ -0.69
SHF-204ENST00000558685 TMEM41AQ96HV5 264 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms