RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ARMCX1Q9P291 453 aa16.09■□□□□ 0.17
TPM1-214ENST00000558544 B3GNT3Q9Y2A9 372 aa16.09■□□□□ 0.17
TPM1-214ENST00000558544 OR10H1Q9Y4A9 318 aa16.09■□□□□ 0.17
TPM1-214ENST00000558544 NPFFR2Q9Y5X5 522 aa16.09■□□□□ 0.17
TPM1-214ENST00000558544 A0A1W2PP18 115 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 CDK2AP1O14519 115 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 TO15178 435 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 SLC25A12O75746 678 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 C1QCP02747 245 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 CHI3L1P36222 383 aaPredicted RBP16.08■□□□□ 0.16
TPM1-214ENST00000558544 RPS26P62854 115 aaKnown RBP16.08■□□□□ 0.16
TPM1-214ENST00000558544 TLR1Q15399 786 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 GTDC1Q4AE62 458 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 SOWAHCQ53LP3 525 aaPredicted RBP16.08■□□□□ 0.16
TPM1-214ENST00000558544 PAGE3Q5JUK9 113 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 BHLHB9Q6PI77 547 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 MDGA2Q7Z553 956 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 MTDHQ86UE4 582 aaKnown RBP16.08■□□□□ 0.16
TPM1-214ENST00000558544 GPALPP1Q8IXQ4 340 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 SLC34A3Q8N130 599 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 HORMAD2Q8N7B1 307 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 TRIML2Q8N7C3 387 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 SLC16A11Q8NCK7 471 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 FAM13CQ8NE31 585 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 OR5M3Q8NGP4 307 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 GPR151Q8TDV0 419 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 PIK3R3Q92569 461 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 HOXB13Q92826 284 aaPredicted RBP16.08■□□□□ 0.16
TPM1-214ENST00000558544 TMBIM1Q969X1 311 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 PNPLA2Q96AD5 504 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 OMA1Q96E52 524 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 ACTRT3Q9BYD9 372 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 Q9N2J8 555 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 KLHL1Q9NR64 748 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 CAPN7Q9Y6W3 813 aa16.08■□□□□ 0.16
TPM1-214ENST00000558544 COL6A6A6NMZ7 2263 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 NINQ8N4C6 2090 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 TRAV17A0A0B4J275 112 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 GXYLT2A0PJZ3 443 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 ANGPT2O15123 496 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 CCDC22O60826 627 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 NKX2-2O95096 273 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 PRB1P04280 392 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 SNRPB2P08579 225 aaKnown RBP16.07■□□□□ 0.16
TPM1-214ENST00000558544 ALOX5P09917 674 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 CD46P15529 392 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 GABRA3P34903 492 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 MAP3K8P41279 467 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 TMED10P49755 219 aaKnown RBP16.07■□□□□ 0.16
TPM1-214ENST00000558544 CASP9P55211 416 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 FBXW4P57775 412 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 NTRK2Q16620 822 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 DUSP5Q16690 384 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 ZNF791Q3KP31 576 aaPredicted RBP16.07■□□□□ 0.16
TPM1-214ENST00000558544 PLEKHN1Q494U1 663 aaPredicted RBP16.07■□□□□ 0.16
TPM1-214ENST00000558544 ZNF766Q5HY98 468 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 EXOSC6Q5RKV6 272 aaKnown RBP16.07■□□□□ 0.16
TPM1-214ENST00000558544 SAXO2Q658L1 398 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 CDC73Q6P1J9 531 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 ZCCHC12Q6PEW1 402 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 ANGPTL8Q6UXH0 198 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 OR10G3Q8NGC4 313 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 OR5D16Q8NGK9 328 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 TMEM125Q96AQ2 219 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 NEURL3Q96EH8 262 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 C5orf34Q96MH7 638 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 PAIP1Q9H074 479 aaKnown RBP16.07■□□□□ 0.16
TPM1-214ENST00000558544 SERHL2Q9H4I8 314 aa16.07■□□□□ 0.16
TPM1-214ENST00000558544 FAF1Q9UNN5 650 aaPredicted RBP16.07■□□□□ 0.16
TPM1-214ENST00000558544 SPTA1P02549 2419 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 TTC36A6NLP5 189 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 CAPN14A8MX76 684 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 PPM1BO75688 479 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 FAM107AO95990 144 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 KRT16P08779 473 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 MATN1P21941 496 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 PTPN6P29350 595 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 TRPC1P48995 793 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 DESI1Q6ICB0 168 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 RTL4Q6ZR62 310 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 DND1Q8IYX4 353 aaKnown RBP16.06■□□□□ 0.16
TPM1-214ENST00000558544 COX18Q8N8Q8 333 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 Q8NA96 180 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 PSD4Q8NDX1 1056 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 PNPT1Q8TCS8 783 aaKnown RBP16.06■□□□□ 0.16
TPM1-214ENST00000558544 ADAMTS15Q8TE58 950 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 EFHD2Q96C19 240 aaPredicted RBP16.06■□□□□ 0.16
TPM1-214ENST00000558544 RMND5BQ96G75 393 aaPredicted RBP16.06■□□□□ 0.16
TPM1-214ENST00000558544 AURKBQ96GD4 344 aaPredicted RBP16.06■□□□□ 0.16
TPM1-214ENST00000558544 OR7D2Q96RA2 312 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 SLAMF8Q9P0V8 285 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 LEF1Q9UJU2 399 aaPredicted RBP16.06■□□□□ 0.16
TPM1-214ENST00000558544 CBLCQ9ULV8 474 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 ARL2BPQ9Y2Y0 163 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 NDUFAF1Q9Y375 327 aa16.06■□□□□ 0.16
TPM1-214ENST00000558544 PRRC2CQ9Y520 2896 aaKnown RBP16.06■□□□□ 0.16
TPM1-214ENST00000558544 A0A096LPI6 279 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 SLC22A2O15244 555 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 REM1O75628 298 aa16.05■□□□□ 0.16
TPM1-214ENST00000558544 SP1P08047 785 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms