RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MS4A4EQ96PG1 132 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 LMF2Q9BU23 707 aaKnown RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 TSPAN10Q9H1Z9 355 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 CLMPQ9H6B4 373 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 NEUROD4Q9HD90 331 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 TCF7L2Q9NQB0 619 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 ZCCHC3Q9NUD5 404 aaKnown RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 NTMQ9P121 344 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 CNOT11Q9UKZ1 510 aaKnown RBP11.36□□□□□ -0.59
SMAD3-205ENST00000558428 NPIPA1Q9UND3 350 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 GPR45Q9Y5Y3 372 aa11.36□□□□□ -0.59
SMAD3-205ENST00000558428 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 TTC36A6NLP5 189 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 C9JVG2 144 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 RNASET2O00584 256 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 EDF1O60869 148 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 IL12AP29459 219 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 IL12BP29460 328 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 S100A3P33764 101 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 SOAT1P35610 550 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 CCT3P49368 545 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 IDH3AP50213 366 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 WNT3P56703 355 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 KCNJ2P63252 427 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 KCNC4Q03721 635 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 GSTA3Q16772 222 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 FAM174BQ3ZCQ3 159 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 SPDYE7PQ495Y7 208 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 PDCD4Q53EL6 469 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 RNFT1Q5M7Z0 435 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 TBCELQ5QJ74 424 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 ANXA8L1Q5VT79 327 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 BICRALQ6AI39 1079 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 DESI1Q6ICB0 168 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 GFRALQ6UXV0 394 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 NUP54Q7Z3B4 507 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 CLECL1Q8IZS7 167 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 CDRT4Q8N9R6 151 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 VPS37AQ8NEZ2 397 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 OR4N2Q8NGD1 307 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 PSMA8Q8TAA3 256 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 FBXO30Q8TB52 745 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 SPPL2AQ8TCT8 520 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 SLC9A6Q92581 669 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 HGDQ93099 445 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 GIMAP5Q96F15 307 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 THOC1Q96FV9 657 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 GPR137Q96N19 417 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 COL21A1Q96P44 957 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 SECISBP2Q96T21 854 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 ZBTB18Q99592 522 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 EBF4Q9BQW3 602 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 DOHHQ9BU89 302 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 TTTY12Q9BZ98 90 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 CXorf36Q9H7Y0 433 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 METTL7AQ9H8H3 244 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 Q9N2J8 555 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 TUBA8Q9NY65 449 aaPredicted RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 SEC14L3Q9UDX4 400 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 CBLCQ9ULV8 474 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 PCDHGB4Q9UN71 923 aa11.35□□□□□ -0.59
SMAD3-205ENST00000558428 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 DIDO1Q9BTC0 2240 aaKnown RBP11.35□□□□□ -0.59
SMAD3-205ENST00000558428 OR6C70A6NIJ9 312 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 FAM166BA8MTA8 275 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 ACOT7O00154 380 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 HS6ST1O60243 411 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 TSPAN2O60636 221 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 ABCB7O75027 752 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 UGT2B11O75310 529 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 WISP2O76076 250 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 UNC5CO95185 931 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 CPSF4O95639 269 aaKnown RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 GABRA3P34903 492 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 CASP3P42574 277 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 PRIM2P49643 509 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 KCNK10P57789 538 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 PPIAP62937 165 aaKnown RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 HBA1P69905 142 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 PHC1P78364 1004 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 FOXO1Q12778 655 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 GAB1Q13480 694 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 TP53BP2Q13625 1128 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 LASP1Q14847 261 aaKnown RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 DECR1Q16698 335 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 EIF2S3LQ2VIR3 472 aaKnown RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 VPS26BQ4G0F5 336 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 CYP27C1Q4G0S4 372 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 MFSD12Q6NUT3 480 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 SLC22A16Q86VW1 577 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 ANKRD46Q86W74 232 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 SIAH3Q8IW03 269 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 GLB1L3Q8NCI6 653 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 OR56A1Q8NGH5 318 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 OR4A15Q8NGL6 344 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 OR5AK3PQ8NH89 298 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 SFXN5Q8TD22 340 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 GPR151Q8TDV0 419 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 JADE3Q92613 823 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms