RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GAB1Q13480 694 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 RCAN2Q14206 197 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 PRICKLE2Q7Z3G6 844 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 CLEC4FQ8N1N0 589 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 CISD2Q8N5K1 135 aaKnown RBP23.52■■□□□ 1.36
SMAD6-202ENST00000557916 OR10G3Q8NGC4 313 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 FBXO30Q8TB52 745 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 C10orf82Q8WW14 230 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 SLC9A6Q92581 669 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 HOXB13Q92826 284 aaPredicted RBP23.52■■□□□ 1.36
SMAD6-202ENST00000557916 YIPF4Q9BSR8 244 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 INPP5KQ9BT40 448 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 FAM107BQ9H098 131 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 EPN3Q9H201 632 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 RMND5AQ9H871 391 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 Q9N2J8 555 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 MAP10Q9P2G4 905 aa23.52■■□□□ 1.36
SMAD6-202ENST00000557916 KLF13Q9Y2Y9 288 aaPredicted RBP23.52■■□□□ 1.36
SMAD6-202ENST00000557916 NUP214P35658 2090 aaPredicted RBP23.51■■□□□ 1.35
SMAD6-202ENST00000557916 RNF103-CHMP3A0A140T963 221 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 NR5A2O00482 541 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 TP53I11O14683 189 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 REM1O75628 298 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 GABRA3P34903 492 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 MAP3K8P41279 467 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 MLLT10P55197 1068 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 LASP1Q14847 261 aaKnown RBP23.51■■□□□ 1.35
SMAD6-202ENST00000557916 INAQ16352 499 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 CYP27C1Q4G0S4 372 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 SLC22A10Q63ZE4 541 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 C6orf120Q7Z4R8 191 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 SLC16A11Q8NCK7 471 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 GPR151Q8TDV0 419 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 PAQR8Q8TEZ7 354 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 NSRP1Q9H0G5 558 aaKnown RBP23.51■■□□□ 1.35
SMAD6-202ENST00000557916 SH2D2AQ9NP31 389 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 SERHLQ9NQF3 203 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 SACM1LQ9NTJ5 587 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 GPATCH2Q9NW75 528 aa23.51■■□□□ 1.35
SMAD6-202ENST00000557916 FAF1Q9UNN5 650 aaPredicted RBP23.51■■□□□ 1.35
SMAD6-202ENST00000557916 CCDC154A6NI56 674 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 NKX2-2O95096 273 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 RASAL1O95294 804 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 P04436 131 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 CCL3P10147 92 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 ACP2P11117 423 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 KRT20P35900 424 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 INPP5JQ15735 1006 aaPredicted RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 ZNF621Q6ZSS3 439 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 CPLX4Q7Z7G2 160 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 SULF2Q8IWU5 870 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 CPSF7Q8N684 471 aaKnown RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 JADE3Q92613 823 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 SPDL1Q96EA4 605 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 ITCHQ96J02 903 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 ELAC2Q9BQ52 826 aaKnown RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 ACTRT3Q9BYD9 372 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 CBLCQ9ULV8 474 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 VPS4AQ9UN37 437 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 CHCHD2Q9Y6H1 151 aaPredicted RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 KLRC4-KLRK1H3BQV0 150 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 RFXANKO14593 260 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 PEX1O43933 1283 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 ALOX5P09917 674 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 DRD4P21917 467 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 CDKN2CP42773 168 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 PRR30Q53SZ7 412 aaPredicted RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 EXOSC6Q5RKV6 272 aaKnown RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 NUP54Q7Z3B4 507 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 SPATA21Q7Z572 469 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 TRIML2Q8N7C3 387 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 FAM98AQ8NCA5 519 aaKnown RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 PIK3R3Q92569 461 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 SNRNP40Q96DI7 357 aaKnown RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 OTUB1Q96FW1 271 aaPredicted RBP23.5■■□□□ 1.35
SMAD6-202ENST00000557916 TAAR6Q96RI8 345 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 SLC35A5Q9BS91 424 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 CNIH4Q9P003 139 aa23.5■■□□□ 1.35
SMAD6-202ENST00000557916 PRRC2CQ9Y520 2896 aaKnown RBP23.49■■□□□ 1.35
SMAD6-202ENST00000557916 GXYLT2A0PJZ3 443 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 GSNP06396 782 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 KRT16P08779 473 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 CD1EP15812 388 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 IL12BP29460 328 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 GPR85P60893 370 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 RPP38P78345 283 aaKnown RBP23.49■■□□□ 1.35
SMAD6-202ENST00000557916 DUSP5Q16690 384 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 DECR1Q16698 335 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 CDC73Q6P1J9 531 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 FBXW8Q8N3Y1 598 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 BCORP1Q8N888 145 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 CPT1CQ8TCG5 803 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 COL21A1Q96P44 957 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 ADOQ96SZ5 270 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 SECISBP2Q96T21 854 aaKnown RBP23.49■■□□□ 1.35
SMAD6-202ENST00000557916 SLC52A3Q9NQ40 469 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 DEPPQ9NTK1 212 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 MRGBPQ9NV56 204 aa23.49■■□□□ 1.35
SMAD6-202ENST00000557916 OR6C70A6NIJ9 312 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms