RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 EPPINO95925 133 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 IFNA14P01570 189 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ATP1B1P05026 303 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 CFIP05156 583 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 GNAO1P09471 354 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 SP9P0CG40 484 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 THRBP10828 461 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ACP2P11117 423 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 PNLIPP16233 465 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 NELFEP18615 380 aaKnown RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 NT5EP21589 574 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 KCNJ5P48544 419 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 DAPP51397 102 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ITGA1P56199 1179 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 BTG2P78543 158 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ADARB1P78563 741 aaKnown RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 CCL7P80098 99 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 HSD11B2P80365 405 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 PRR5P85299 388 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 MERTKQ12866 999 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 SQSTM1Q13501 440 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 NDUFA9Q16795 377 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 PRICKLE4Q2TBC4 344 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ZIK1Q3SY52 487 aaPredicted RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 SLC36A3Q495N2 470 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 TCTE1Q5JU00 501 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 MFSD12Q6NUT3 480 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 CDC73Q6P1J9 531 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 BHLHB9Q6PI77 547 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 WDR74Q6RFH5 385 aaPredicted RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 ISLR2Q6UXK2 745 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 USP51Q70EK9 711 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ZNF605Q86T29 641 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 PLXDC1Q8IUK5 500 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ARMC8Q8IUR7 673 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 LACC1Q8IV20 430 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 SVOPLQ8N434 492 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 METTL25Q8N6Q8 603 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 FAM181AQ8N9Y4 354 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 TTC29Q8NA56 475 aaPredicted RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 ZBTB44Q8NCP5 570 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 OR6C4Q8NGE1 309 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 OR4C15Q8NGM1 316 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 OR1L3Q8NH93 324 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 SPPL2AQ8TCT8 520 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 GEMIN6Q8WXD5 167 aaKnown RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 CTHRC1Q96CG8 243 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ZG16BQ96DA0 208 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 PEX11GQ96HA9 241 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 FBXL20Q96IG2 436 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 COL21A1Q96P44 957 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 DUSP23Q9BVJ7 150 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ACTRT3Q9BYD9 372 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ANKRD60Q9BZ19 345 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 AMBRA1Q9C0C7 1298 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 GABARAPL1Q9H0R8 117 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 SLC38A1Q9H2H9 487 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 Q9H521 79 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 GAREM1Q9H706 876 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 C3orf14Q9HBI5 128 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 BCL2L10Q9HD36 194 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 EQTNQ9NQ60 294 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 THSD1Q9NS62 852 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 DDX18Q9NVP1 670 aaKnown RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 IRAK4Q9NWZ3 460 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 THUMPD1Q9NXG2 353 aaKnown RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 SMPD3Q9NY59 655 aaPredicted RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 MAT2BQ9NZL9 334 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 PTGFRNQ9P2B2 879 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 TMEFF2Q9UIK5 374 aaPredicted RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 C19orf53Q9UNZ5 99 aaPredicted RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 CLCA2Q9UQC9 943 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 ENPP4Q9Y6X5 453 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 SPACA6W5XKT8 324 aa6.88□□□□□ -1.31
SPG11-204ENST00000557866 MDC1Q14676 2089 aaKnown RBP6.88□□□□□ -1.31
SPG11-204ENST00000557866 DMDP11532 3685 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 GOLGA4Q13439 2230 aaKnown RBP6.87□□□□□ -1.31
SPG11-204ENST00000557866 A0A087WV62 115 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 CPED1A4D0V7 1026 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 EME2A4GXA9 379 aaPredicted RBP6.87□□□□□ -1.31
SPG11-204ENST00000557866 TMEM150CB9EJG8 249 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 HRKO00198 91 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 FFAR1O14842 300 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 ZNF749O43361 778 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 ASNA1O43681 348 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 PLOD3O60568 738 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 CTNSO60931 367 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 MITFO75030 526 aaPredicted RBP6.87□□□□□ -1.31
SPG11-204ENST00000557866 E2F6O75461 281 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 JRKO75564 520 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 H6PDO95479 791 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 CLIC3O95833 236 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 CBX7O95931 251 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 HPRP00739 348 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 FESP07332 822 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 IFI6P09912 130 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 SLC35E2P0CK97 266 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 SMIM18P0DKX4 95 aa6.87□□□□□ -1.31
SPG11-204ENST00000557866 NR2F1P10589 423 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms