RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PURGQ9UJV8 347 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 ING1Q9UK53 422 aaPredicted RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 EIF3LQ9Y262 564 aaKnown RBP3.34□□□□□ -1.87
TDP1-217ENST00000557782 STK38LQ9Y2H1 464 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 RNF215Q9Y6U7 377 aa3.34□□□□□ -1.87
TDP1-217ENST00000557782 TMEM94Q12767 1356 aa3.34□□□□□ -1.88
TDP1-217ENST00000557782 PPIAL4EA0A075B759 164 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 IGHV4OR15-8A0A075B7B6 117 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 A0A0J9YVX5 310 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 LOC390937A0A1W2PQ73 354 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 LRIT2A6NDA9 550 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 A8MU76 341 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 TMCO5BA8MYB1 307 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 C9JVG2 144 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 ANHXE9PGG2 379 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 NPIPA7E9PJI5 369 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 KIF2AO00139 706 aaPredicted RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 NDUFS8O00217 210 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 EI24O14681 340 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 IMPA2O14732 288 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CASKO14936 926 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 LSM1O15116 133 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 SIGLEC5O15389 551 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 STX11O75558 287 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 ANGPTL1O95841 491 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 NPIPA8P0DM63 369 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 PPIAL4FP0DN26 164 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 PSG1P11464 419 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 TNNI1P19237 187 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CYP2B6P20813 491 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 C4BPBP20851 252 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CD9P21926 228 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 HOXD10P28358 340 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CD1BP29016 333 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 FDFT1P37268 417 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 SLC1A4P43007 532 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 MAGEA5P43359 124 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CDKN1BP46527 198 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 OR3A2P47893 321 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CASP4P49662 377 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 TPMTP51580 245 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 RAG2P55895 527 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 RPL27P61353 136 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 NTHL1P78549 312 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 ACY1Q03154 408 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 MERTKQ12866 999 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 MAB21L1Q13394 359 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 ATXN7L3Q14CW9 347 aaPredicted RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 CHI3L2Q15782 390 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 EZH2Q15910 746 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 KLHL40Q2TBA0 621 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 SNAI3Q3KNW1 292 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 GGTA1PQ4G0N0 100 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 OR4F3Q6IEY1 312 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 OR2A2Q6IF42 318 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 FAM71F2Q6NXP2 309 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 SCYL2Q6P3W7 929 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 TMEM107Q6UX40 140 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 UNQ6126/PRO20091Q6UXV3 157 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 ZNF852Q6ZMS4 543 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 UTS2BQ765I0 119 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 RD3Q7Z3Z2 195 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 PIGZQ86VD9 579 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CCDC50Q8IVM0 306 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 KATNAL2Q8IYT4 538 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 DND1Q8IYX4 353 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 NAGSQ8N159 534 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 FBXL14Q8N1E6 418 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 MARVELD2Q8N4S9 558 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 MAB21L3Q8N8X9 362 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 MNS1Q8NEH6 495 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 TRPV1Q8NER1 839 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 OR4C5Q8NGB2 326 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 OR5M9Q8NGP3 310 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 OR1L4Q8NGR5 311 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 OR1F12Q8NHA8 337 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 APOBEC4Q8WW27 367 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 PELI1Q96FA3 418 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 PANX1Q96RD7 426 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 BPIFA3Q9BQP9 254 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 FEM1AQ9BSK4 669 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 PARD6BQ9BYG5 372 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 STRADBQ9C0K7 418 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CHMP4BQ9H444 224 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 RHOJQ9H4E5 214 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 FNDC4Q9H6D8 234 aaPredicted RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 LRRC4Q9HBW1 653 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 CHRAC1Q9NRG0 131 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 DCAF13Q9NV06 445 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 PEF1Q9UBV8 284 aaKnown RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 PISDQ9UG56 409 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 NPIPA1Q9UND3 350 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 PPIAL4AQ9Y536 164 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 DMRT1Q9Y5R6 373 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 KLF2Q9Y5W3 355 aaPredicted RBP3.33□□□□□ -1.88
TDP1-217ENST00000557782 PNPLA6Q8IY17 1366 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 NINLQ9Y2I6 1382 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 SYNJ2O15056 1496 aa3.33□□□□□ -1.88
TDP1-217ENST00000557782 IGHV4-61A0A0C4DH41 118 aa3.32□□□□□ -1.88
TDP1-217ENST00000557782 LY6G6EA0A0G2JKS1 128 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms