RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 M6PRP20645 277 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 GALP22466 123 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ACADLP28330 430 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC6A1P30531 599 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ANXA11P50995 505 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 AP2S1P53680 142 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 MAP4K2Q12851 820 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 GNA13Q14344 377 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 GPR176Q14439 515 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF791Q3KP31 576 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 CLEC12AQ5QGZ9 265 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ANKRD54Q6NXT1 300 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 RRM2BQ7LG56 351 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 HMGN2P46Q86SG4 172 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 LRRC17Q8N6Y2 441 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 SUN3Q8TAQ9 357 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 CYB5D2Q8WUJ1 264 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 NR4A3Q92570 626 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 DTD2Q96FN9 168 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 SCLYQ96I15 445 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 UBL7Q96S82 380 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 PINK1Q9BXM7 581 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 MED28Q9H204 178 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 PIGUQ9H490 435 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 DPEP2Q9H4A9 486 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 C11orf49Q9H6J7 331 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 RRAGCQ9HB90 399 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TEX10Q9NXF1 929 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ITM2BQ9Y287 266 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 C17orf113A0A1B0GUU1 675 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 LEUTXA8MZ59 168 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TMPRSS11DO60235 418 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 POP7O75817 140 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 DHFRP00374 187 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 LRG1P02750 347 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ACP5P13686 325 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TYRP14679 529 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ATP6V1E1P36543 226 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TALDO1P37837 337 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 AGFG1P52594 562 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 CAP1Q01518 475 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TLE2Q04725 743 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 LRRC32Q14392 662 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TRAM2Q15035 370 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 AADACL4Q5VUY2 407 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 FAM205BPQ63HN1 556 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 ANKRD53Q8N9V6 530 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 VN1R2Q8NFZ6 395 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 OR4M2Q8NGB6 313 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 SPRYD4Q8WW59 207 aaPredicted RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 SORCS1Q8WY21 1168 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 RGMAQ96B86 450 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 PHF21AQ96BD5 680 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 MTG2Q9H4K7 406 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 TAC3Q9UHF0 121 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 CBLCQ9ULV8 474 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 CCL26Q9Y258 94 aa11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 EXOGQ9Y2C4 368 aaKnown RBP11.11□□□□□ -0.63
VIPAS39-211ENST00000557658 A0A0G2JPF8 293 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 HNRNPCL2B2RXH8 293 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 HNRNPCL3B7ZW38 293 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 NRG2O14511 850 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 SHOXO15266 292 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 TEX28O15482 410 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 FABP7O15540 132 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 NDUFS4O43181 175 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 CHRM4P08173 479 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 HNRNPCL4P0DMR1 293 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 INSL4Q14641 139 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 EOGTQ5NDL2 527 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 IDNKQ5T6J7 187 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 ZBTB37Q5TC79 503 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 TMEM215Q68D42 235 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 KIAA1161Q6NSJ0 714 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 GJD3Q8N144 294 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 OSTF1Q92882 214 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 UCN3Q969E3 161 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 RFT1Q96AA3 541 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 OTUB1Q96FW1 271 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 FAM46AQ96IP4 442 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 LRIG1Q96JA1 1093 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF514Q96K75 400 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 LINC00615Q96LM1 132 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 COQ10AQ96MF6 247 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 AMDHD1Q96NU7 426 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 SECISBP2Q96T21 854 aaKnown RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 KCNN2Q9H2S1 579 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 GLIPR2Q9H4G4 154 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 SAGE1Q9NXZ1 904 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 CNIH4Q9P003 139 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 PTGFRNQ9P2B2 879 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC13A4Q9UKG4 626 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 A0A0A6YYJ9 748 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 CHP2O43745 196 aa11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 LZTS3O60299 673 aaPredicted RBP11.1□□□□□ -0.63
VIPAS39-211ENST00000557658 RGS9O75916 674 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms