RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MID1IP1Q9NPA3 183 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 SERHLQ9NQF3 203 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 DNAJB12Q9NXW2 375 aaKnown RBP12.91□□□□□ -0.34
SNX6-210ENST00000557341 DCDC2Q9UHG0 476 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 TIMM22Q9Y584 194 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 WIF1Q9Y5W5 379 aa12.91□□□□□ -0.34
SNX6-210ENST00000557341 SERTM1A2A2V5 107 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 C2orf72A6NCS6 295 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 SYT5O00445 386 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 REM1O75628 298 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CTAG2O75638 210 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CBR3O75828 277 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 ANXA4P09525 319 aaPredicted RBP12.9□□□□□ -0.34
SNX6-210ENST00000557341 FAM153BP0C7A2 387 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CT45A8P0DMV1 189 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CT45A9P0DMV2 189 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 MYL2P10916 166 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CYP4B1P13584 511 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 DNAJA1P31689 397 aaKnown RBP12.9□□□□□ -0.34
SNX6-210ENST00000557341 MPIP34949 423 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 RIPPLY3P57055 190 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CORO7P57737 925 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 NAA20P61599 178 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 BTKQ06187 659 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 SNTB1Q13884 538 aaKnown RBP12.9□□□□□ -0.34
SNX6-210ENST00000557341 EFR3AQ14156 821 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 IMPG1Q17R60 797 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 FAM153CQ494X1 144 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CT45A2Q5DJT8 189 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 POMZP3Q6PJE2 187 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 ENPP6Q6UWR7 440 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CCNYL1Q8N7R7 359 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 WDSUB1Q8N9V3 476 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CDC26Q8NHZ8 85 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 VSTM2LQ96N03 204 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 ADOQ96SZ5 270 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 RHOXF2Q9BQY4 288 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 GPATCH1Q9BRR8 931 aaKnown RBP12.9□□□□□ -0.34
SNX6-210ENST00000557341 POLDIP3Q9BY77 421 aaKnown RBP12.9□□□□□ -0.34
SNX6-210ENST00000557341 TXLNGYQ9BZA5 131 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 STMN4Q9H169 189 aaPredicted RBP12.9□□□□□ -0.34
SNX6-210ENST00000557341 CALHM2Q9HA72 323 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 FOLH1BQ9HBA9 442 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 MIEF1Q9NQG6 463 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 SIRT5Q9NXA8 310 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 TAS2R9Q9NYW1 312 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 CRIM1Q9NZV1 1036 aa12.9□□□□□ -0.34
SNX6-210ENST00000557341 PRRC2AP48634 2157 aaKnown RBP12.9□□□□□ -0.34
SNX6-210ENST00000557341 SETD2Q9BYW2 2564 aaPredicted RBP12.89□□□□□ -0.35
SNX6-210ENST00000557341 EEF1E1-BLOC1S5C9J1V9 151 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 H0Y3Z8 333 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 H3BQF6 201 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 EEF1E1O43324 174 aaKnown RBP12.89□□□□□ -0.35
SNX6-210ENST00000557341 PLOD3O60568 738 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 TSPAN2O60636 221 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 COQ9O75208 318 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 SLITRK5O94991 958 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 CPN1P15169 458 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 DDCP20711 480 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 TACR1P25103 407 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 CTSSP25774 331 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 OPRM1P35372 400 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 ART1P52961 327 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 FOXA1P55317 472 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 MRPS22P82650 360 aaKnown RBP12.89□□□□□ -0.35
SNX6-210ENST00000557341 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
SNX6-210ENST00000557341 SCIMPQ6UWF3 145 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 NPSR1Q6W5P4 371 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 ZYG11AQ6WRX3 759 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 FRMD7Q6ZUT3 714 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 PLCZ1Q86YW0 608 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 GSPT2Q8IYD1 628 aaKnown RBP12.89□□□□□ -0.35
SNX6-210ENST00000557341 RDH11Q8TC12 318 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 ZPLD1Q8TCW7 415 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 FAM222BQ8WU58 562 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 NRGNQ92686 78 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 NINJ1Q92982 152 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 BBS4Q96RK4 519 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 CLEC4MQ9H2X3 399 aaPredicted RBP12.89□□□□□ -0.35
SNX6-210ENST00000557341 EPB41L4BQ9H329 900 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 TAS2R10Q9NYW0 307 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 DKKL1Q9UK85 242 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 EMCNQ9ULC0 261 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
SNX6-210ENST00000557341 A6NNC1 897 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 UBFD1O14562 309 aaKnown RBP12.88□□□□□ -0.35
SNX6-210ENST00000557341 NME6O75414 186 aaPredicted RBP12.88□□□□□ -0.35
SNX6-210ENST00000557341 CRCPO75575 148 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 IL18BPO95998 194 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 TMIGD3P0DMS9 266 aaPredicted RBP12.88□□□□□ -0.35
SNX6-210ENST00000557341 SRD5A2P31213 254 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 DGKQP52824 942 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 PNLIPRP2P54317 469 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 GFRA1P56159 465 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 CCDC153Q494R4 210 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 AAGABQ6PD74 315 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 LARP4Q71RC2 724 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNX6-210ENST00000557341 KIF18BQ86Y91 864 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms