RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 BCDIN3DQ7Z5W3 292 aaKnown RBP14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR10H5Q8NGA6 315 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 MYEOVQ96EZ4 313 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 CWH43Q9H720 699 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR2AT4A6NND4 320 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 SMAD9O15198 467 aaKnown RBP14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 HTR1AP08908 422 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 ACRP10323 421 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 AHCYP23526 432 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 DDOSTP39656 456 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 SEC13P55735 322 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 ILF3Q12906 894 aaKnown RBP eCLIP14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 PRAMEF17Q5VTA0 474 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 CNKSR3Q6P9H4 555 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 ZNF227Q86WZ6 799 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 UBQLNLQ8IYU4 475 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 MS4A15Q8N5U1 240 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 CLDN22Q8N7P3 220 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 CAMKVQ8NCB2 501 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 FOXJ1Q92949 421 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 FKBP10Q96AY3 582 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 OTUB2Q96DC9 234 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 HSPA12BQ96MM6 686 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 GABARAPL3Q9BY60 117 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 OR10A4Q9H209 315 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 PLCXD1Q9NUJ7 323 aa14.22□□□□□ -0.13
ARHGEF40-207ENST00000556399 TRBV2A0A0J9YWF9 115 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 TRIM3O75382 744 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 CLEC2LP0C7M8 214 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 TGM1P22735 817 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 GNALP38405 381 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 CD300CQ08708 224 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 ILKQ13418 452 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 ENPP2Q13822 863 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 C17orf99Q6UX52 265 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC16A12Q6ZSM3 486 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 FAM109AQ8N4B1 249 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 DNAJC5GQ8N7S2 189 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 SLC38A5Q8WUX1 472 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 CPEB1Q9BZB8 566 aaKnown RBP14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 TRPV4Q9HBA0 871 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 ITGBL1O95965 494 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 IMPA1P29218 277 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 PTGER1P34995 402 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 ERN2Q76MJ5 926 aaKnown RBP14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 BHLHA9Q7RTU4 235 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 GALNT6Q8NCL4 622 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 CASD1Q96PB1 797 aa14.21□□□□□ -0.13
ARHGEF40-207ENST00000556399 SOX30O94993 753 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 ACPPP15309 386 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 PFN3P60673 137 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 RAB33AQ14088 237 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 PLK5Q496M5 336 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 SCGB2B2Q4G0G5 96 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 C8orf82Q6P1X6 216 aaPredicted RBP14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR4F15Q8NGB8 312 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 RELTQ969Z4 430 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 ISG20Q96AZ6 181 aaKnown RBP14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 KATNBL1Q9H079 304 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC6A15Q9H2J7 730 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR51J1Q9H342 316 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 DDX31Q9H8H2 851 aaKnown RBP14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 NANSQ9NR45 359 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 RBFOX1Q9NWB1 397 aaKnown RBP14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 MYO10Q9HD67 2058 aa14.21□□□□□ -0.14
ARHGEF40-207ENST00000556399 FGF18O76093 207 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 C1orf105O95561 183 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 MAPK3P27361 379 aaPredicted RBP14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 DEFB115Q30KQ5 88 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 TMEM35AQ53FP2 167 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC22A10Q63ZE4 541 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 KIAA1217Q5T5P2 1943 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SSC5DA1L4H1 1573 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 WASHC1A8K0Z3 465 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 BLOC1S5-TXNDC5H3BN57 136 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 FURINP09958 794 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 RACK1P63244 317 aaKnown RBP14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SNTA1Q13424 505 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 WDR45BQ5MNZ6 344 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 KLHDC8AQ8IYD2 350 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SDR16C5Q8N3Y7 309 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 LSM14AQ8ND56 463 aaKnown RBP14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 PINK1Q9BXM7 581 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLIRPQ9GZT3 109 aaKnown RBP14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 EGLN3Q9H6Z9 239 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 IFT46Q9NQC8 304 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 NUBP2Q9Y5Y2 271 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 HMGN2P05204 90 aaKnown RBP14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 EPCAMP16422 314 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 NDUFS1P28331 727 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 PUM1Q14671 1186 aaKnown RBP eCLIP14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 PDGFRLQ15198 375 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 ALG11Q2TAA5 492 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 LIMS2Q7Z4I7 341 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR8K3Q8NH51 312 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 OR5W2Q8NH69 310 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 DOK4Q8TEW6 326 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC7A6Q92536 515 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 SLC35B4Q969S0 331 aa14.2□□□□□ -0.14
ARHGEF40-207ENST00000556399 ZNF419Q96HQ0 510 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms