RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 PKLRP30613 574 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 TM4SF4P48230 202 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 IST1P53990 364 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 EMP2P54851 167 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 SELENOWP63302 87 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 BNIP3Q12983 259 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 OGFRL1Q5TC84 451 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 FAM83HQ6ZRV2 1179 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 ISCA2Q86U28 154 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 CNTN4Q8IWV2 1026 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 ZFPM2Q8WW38 1151 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM203Q969S6 136 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 PITX2Q99697 317 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 OR2B2Q9GZK3 357 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 FBRSL1Q9HCM7 1045 aaKnown RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 UBQLN2Q9UHD9 624 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 LTN1O94822 1766 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 C13orf42A0A1B0GVH6 325 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 SCO2O43819 266 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 GLSO94925 669 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 RPS17P08708 135 aaKnown RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 CSF1P09603 554 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 PPP5CP53041 499 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 CEBPGP53567 150 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 RAB40BQ12829 278 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 COL28A1Q2UY09 1125 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 LRIT3Q3SXY7 679 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 YOD1Q5VVQ6 348 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 PSAPL1Q6NUJ1 521 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 TMPRSS12Q86WS5 348 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 OR8S1Q8NH09 359 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 LGALS12Q96DT0 336 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 DTD2Q96FN9 168 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 SLC41A3Q96GZ6 507 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM19Q96HH6 336 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 LRR1Q96L50 414 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 CCNL2Q96S94 520 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 FAM118AQ9NWS6 357 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 SOX14O95416 240 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 CAPN3P20807 821 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 PON2Q15165 354 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 RSU1Q15404 277 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 RTP2Q5QGT7 225 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 NDUFAF5Q5TEU4 345 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 KLHDC8BQ8IXV7 354 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF595Q8IYB9 648 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 WDTC1Q8N5D0 677 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 OR13C3Q8NGS6 347 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 ADAMTS14Q8WXS8 1223 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 ARMC5Q96C12 935 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 FCRL3Q96P31 734 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-216ENST00000556083 HCAR1Q9BXC0 346 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 POU2F3Q9UKI9 436 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 GABRQQ9UN88 632 aa10.17□□□□□ -0.78
ACTN1-216ENST00000556083 ZSCAN5BA6NJL1 495 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ANHXE9PGG2 379 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 PTGESO14684 152 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 PCDH17O14917 1159 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 SCGB1D2O95969 90 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 IFNA4P05014 189 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 GCH1P30793 250 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 PRKXP51817 358 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ERVK-16P61578 105 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 SOX4Q06945 474 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 SLC22A16Q86VW1 577 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 CRYGNQ8WXF5 182 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ISOC1Q96CN7 298 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 TXNDC15Q96J42 360 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 PRRC1Q96M27 445 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 MUS81Q96NY9 551 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR5B12Q96R08 314 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 WDR77Q9BQA1 342 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 KLF16Q9BXK1 252 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF350Q9GZX5 532 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 TMEM168Q9H0V1 697 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ZNF442Q9H7R0 627 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 NIPAL2Q9H841 368 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 GORASP2Q9H8Y8 452 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 TMLHEQ9NVH6 421 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 CPNE7Q9UBL6 633 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 KIF25Q9UIL4 384 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 BOKQ9UMX3 212 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 UBE2J1Q9Y385 318 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-216ENST00000556083 DNAJC15Q9Y5T4 150 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 A0A1B0GVT2 93 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 A6NLC8 198 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 AXIN1O15169 862 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 CXCL12P48061 93 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 SEMG2Q02383 582 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 MICAQ29983 383 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 ACTBL2Q562R1 376 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 VWA5B2Q8N398 1253 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR1J2Q8NGS2 313 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 SLC2A12Q8TD20 617 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 PHYHIPQ92561 330 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 BADQ92934 168 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 BTBD2Q9BX70 525 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR10A5Q9H207 317 aa10.16□□□□□ -0.78
ACTN1-216ENST00000556083 OR10A2Q9H208 303 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms