RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 TAS2R1Q9NYW7 299 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 STMN3Q9NZ72 180 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 MRTO4Q9UKD2 239 aaKnown RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 LIPT1Q9Y234 373 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 DTX4Q9Y2E6 619 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 L3MBTL1Q9Y468 752 aa11.54□□□□□ -0.56
SHMT2-221ENST00000555773 NUP214P35658 2090 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-221ENST00000555773 TMEM247A6NEH6 219 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 MASP2O00187 686 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 HMGN4O00479 90 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 DNAJA2O60884 412 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 CEACAM4O75871 244 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 GUSBP08236 651 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 OR12D1P0DN82 309 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 ACP2P11117 423 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 CCL11P51671 97 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 NR0B1P51843 470 aaKnown RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 PSMD4P55036 377 aaKnown RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 EEFSECP57772 596 aaKnown RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 MTPNP58546 118 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 DSTNP60981 165 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 RBBP4Q09028 425 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 GNA13Q14344 377 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 DUSP5Q16690 384 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 LACTB2Q53H82 288 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 RABL3Q5HYI8 236 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 ACER2Q5QJU3 275 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 COX20Q5RI15 118 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 AGAP7PQ5VUJ5 663 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 AP1ARQ63HQ0 302 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 RINLQ6ZS11 566 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 GPR155Q7Z3F1 870 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 YTHDF3Q7Z739 585 aaKnown RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 ARHGAP24Q8N264 748 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 HORMAD2Q8N7B1 307 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 AMER2Q8N7J2 671 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 SLC22A8Q8TCC7 542 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 PNPT1Q8TCS8 783 aaKnown RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 XAGE5Q8WWM1 108 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 TMEM125Q96AQ2 219 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 AGAP4Q96P64 663 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 LMF1Q96S06 567 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 BTBD10Q9BSF8 475 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 BTBD2Q9BX70 525 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 NXF5Q9H1B4 397 aaKnown RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 SERHL2Q9H4I8 314 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 IKZF5Q9H5V7 419 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 TMEM38AQ9H6F2 299 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 CMTM6Q9NX76 183 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 TMEM181Q9P2C4 612 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 CBLCQ9ULV8 474 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 OR10H1Q9Y4A9 318 aa11.53□□□□□ -0.56
SHMT2-221ENST00000555773 ANKRD11Q6UB99 2663 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-221ENST00000555773 ACACBO00763 2458 aa11.52□□□□□ -0.56
SHMT2-221ENST00000555773 A8MVJ9 347 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 WWP2O00308 870 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 GYG2O15488 501 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 NME6O75414 186 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 TNFRSF21O75509 655 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ITGA10O75578 1167 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 DNAJB5O75953 348 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 C1QCP02747 245 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ITGB2P05107 769 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ETFAP13804 333 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 LCN1P31025 176 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 PIGAP37287 484 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 SLC7A2P52569 658 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 CASP9P55211 416 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 CORO7P57737 925 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 RPS26P62854 115 aaKnown RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 POU6F2P78424 691 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 MRPS22P82650 360 aaKnown RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 DECR1Q16698 335 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ARHGAP11BQ3KRB8 267 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 DNAL1Q4LDG9 190 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ABHD17BQ5VST6 288 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 HEPHL1Q6MZM0 1159 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 TNFAIP8L2Q6P589 184 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 BORAQ6PGQ7 559 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 OPN5Q6U736 354 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ISLR2Q6UXK2 745 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 NPSR1Q6W5P4 371 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 WDR53Q7Z5U6 358 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 NET1Q7Z628 596 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 DND1Q8IYX4 353 aaKnown RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 DEFB107AQ8IZN7 70 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 SLC34A3Q8N130 599 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 SIRT6Q8N6T7 355 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 COX18Q8N8Q8 333 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 CHDHQ8NE62 594 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 OR5D16Q8NGK9 328 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 OR10A6Q8NH74 314 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 FBXO27Q8NI29 283 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 FAM110BQ8TC76 370 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 THAP3Q8WTV1 239 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 PMM1Q92871 262 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 SLC7A6OSQ96CW6 309 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF583Q96ND8 569 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 TRNT1Q96Q11 434 aaKnown RBP11.52□□□□□ -0.57
SHMT2-221ENST00000555773 CDRT15Q96T59 188 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms