RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PSMD4P55036 377 aaKnown RBP13.19□□□□□ -0.3
CHD8-208ENST00000555301 OC90Q02509 493 aaPredicted RBP13.19□□□□□ -0.3
CHD8-208ENST00000555301 PLCXD2Q0VAA5 305 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 NNATQ16517 81 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 TRMT5Q32P41 509 aaKnown RBP13.19□□□□□ -0.3
CHD8-208ENST00000555301 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 EXOSC6Q5RKV6 272 aaKnown RBP13.19□□□□□ -0.3
CHD8-208ENST00000555301 DLEU7Q6UYE1 221 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 NPSR1Q6W5P4 371 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 SLC34A3Q8N130 599 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 ZADH2Q8N4Q0 377 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 FITM2Q8N6M3 262 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 HORMAD2Q8N7B1 307 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 POU5F2Q8N7G0 328 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 SLC16A11Q8NCK7 471 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 GPR151Q8TDV0 419 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 YIPF4Q9BSR8 244 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
CHD8-208ENST00000555301 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 ZBTB20Q9HC78 741 aaPredicted RBP13.19□□□□□ -0.3
CHD8-208ENST00000555301 HPF1Q9NWY4 346 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 VAPAQ9P0L0 249 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 CBLCQ9ULV8 474 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 CORO2BQ9UQ03 480 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 NPFFR2Q9Y5X5 522 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 GMEB1Q9Y692 573 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 PTPRQQ9UMZ3 2332 aa13.19□□□□□ -0.3
CHD8-208ENST00000555301 SCN2AQ99250 2005 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 TRBV5-3A0A0A0MS03 114 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 EVPLLA8MZ36 301 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 CLIC1O00299 241 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 DPM1O60762 260 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 ABCB7O75027 752 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 FBXO45P0C2W1 286 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 SOX3P41225 446 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 MAN2A2P49641 1150 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 KHKP50053 298 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 TUBA3CQ13748 450 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 KRT72Q14CN4 511 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 DUSP5Q16690 384 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 DECR1Q16698 335 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 LACTB2Q53H82 288 aaPredicted RBP13.18□□□□□ -0.3
CHD8-208ENST00000555301 TUBA3EQ6PEY2 450 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 ASB18Q6ZVZ8 466 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 WDR53Q7Z5U6 358 aaPredicted RBP13.18□□□□□ -0.3
CHD8-208ENST00000555301 RNF130Q86XS8 419 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 MSRB3Q8IXL7 192 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 COX18Q8N8Q8 333 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 OR52N2Q8NGI0 321 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 FBXO30Q8TB52 745 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 ROPN1LQ96C74 230 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 RCN3Q96D15 328 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 SPACA9Q96E40 222 aaPredicted RBP13.18□□□□□ -0.3
CHD8-208ENST00000555301 OMA1Q96E52 524 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 SGCZQ96LD1 299 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 OR7D2Q96RA2 312 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 CGREF1Q99674 301 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 OR51I1Q9H343 314 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 EXD2Q9NVH0 621 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 THUMPD1Q9NXG2 353 aaKnown RBP13.18□□□□□ -0.3
CHD8-208ENST00000555301 SLC25A37Q9NYZ2 338 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 PLA2G3Q9NZ20 509 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 LRFN1Q9P244 771 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.18□□□□□ -0.3
CHD8-208ENST00000555301 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 TP53TG5Q9Y2B4 290 aa13.18□□□□□ -0.3
CHD8-208ENST00000555301 LOC400499M0QZD8 3231 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 ZNF354AO60765 605 aaPredicted RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 PPM1BO75688 479 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 OR6B1O95007 311 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 AK1P00568 194 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 PDGFAP04085 211 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 PIGAP37287 484 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 CD96P40200 585 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 MNAT1P51948 309 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 RPS26P62854 115 aaKnown RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 POU6F2P78424 691 aaPredicted RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 MRPS22P82650 360 aaKnown RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 CBX1P83916 185 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 FADDQ13158 208 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 OR1C1Q15619 314 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 NTRK2Q16620 822 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 ZNF791Q3KP31 576 aaPredicted RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 RUNDC3AQ59EK9 446 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 ATAD3BQ5T9A4 648 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 TNFAIP8L2Q6P589 184 aaPredicted RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 LYPD8Q6UX82 237 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 IL20RBQ6UXL0 311 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 CYP4Z2PQ8N1L4 340 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 EXD3Q8N9H8 876 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 GOLM1Q8NBJ4 401 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 OR4N2Q8NGD1 307 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 OR5D16Q8NGK9 328 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 PNPT1Q8TCS8 783 aaKnown RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 PIK3R3Q92569 461 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 TMBIM1Q969X1 311 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 LRRC58Q96CX6 371 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 SLC35A4Q96G79 324 aa13.17□□□□□ -0.3
CHD8-208ENST00000555301 AURKBQ96GD4 344 aaPredicted RBP13.17□□□□□ -0.3
CHD8-208ENST00000555301 ANKRD27Q96NW4 1050 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms