RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PPCDCQ96CD2 204 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF582Q96NG8 517 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GHITMQ9H3K2 345 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 DPEP2Q9H4A9 486 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 DMRT3Q9NQL9 472 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 LYARQ9NX58 379 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GPR34Q9UPC5 381 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ICKQ9UPZ9 632 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 EXO1Q9UQ84 846 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC27A6Q9Y2P4 619 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 INSL6Q9Y581 213 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 NUBP2Q9Y5Y2 271 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 A0A0A6YYJ9 748 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 CASC3O15234 703 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 VEGFDO43915 354 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 LILRB5O75023 590 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SERPINI2O75830 405 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ADH1CP00326 375 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 TP53P04637 393 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 RBMS1P29558 406 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 PDHA2P29803 388 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 PBLDP30039 288 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 RFX3P48380 749 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SMSP52788 366 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ERVFC1P60507 584 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 POU6F2P78424 691 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 CDK5Q00535 292 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 FABP5Q01469 135 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 UBE3AQ05086 875 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GALEQ14376 348 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 PUM1Q14671 1186 aaKnown RBP eCLIP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 DHCR24Q15392 516 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 FCN2Q15485 313 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SF1Q15637 639 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 FLYWCH1Q4VC44 716 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC36A4Q6YBV0 504 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GET4Q7L5D6 327 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 COMMD6Q7Z4G1 85 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 MRGPREQ86SM8 312 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GLCCI1Q86VQ1 547 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 LILRA3Q8N6C8 439 aaPredicted RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 ARIH2OSQ8N7S6 290 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 C16orf78Q8WTQ4 265 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 SMG7Q92540 1137 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 RFT1Q96AA3 541 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 CCDC120Q96HB5 630 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 GFM1Q96RP9 751 aaKnown RBP10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 IL23AQ9NPF7 189 aa10.08□□□□□ -0.8
MTHFD1-210ENST00000555252 MTCL1Q9Y4B5 1905 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 A0A1W2PRQ8 180 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 HIDE1A8MVS5 230 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 C5orf58C9J3I9 102 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 KPNA3O00505 521 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 TLX2O43763 284 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 AKAP8O43823 692 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 LZTS3O60299 673 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 POU2F2P09086 479 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 ACRP10323 421 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 ADH5P11766 374 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 BDH1Q02338 343 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 DPTQ07507 201 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 C2orf80Q0P641 193 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 GPR176Q14439 515 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 GRIN2CQ14957 1233 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 SLC5A12Q1EHB4 618 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 LEXMQ3ZCV2 418 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 PLPP4Q5VZY2 271 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 TYW3Q6IPR3 259 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 FAM71E1Q6IPT2 247 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 TCTN3Q6NUS6 607 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 CELF5Q8N6W0 485 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF485Q8NCK3 441 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 OR8D1Q8WZ84 308 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 TMEM203Q969S6 136 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 PHF21AQ96BD5 680 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 NUS1Q96E22 293 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 OTUB1Q96FW1 271 aaPredicted RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 ZNF354BQ96LW1 612 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 C7orf50Q9BRJ6 194 aaKnown RBP10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 JAM3Q9BX67 310 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 DPAGT1Q9H3H5 408 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 MED9Q9NWA0 146 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 TVP23BQ9NYZ1 205 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 AHSPQ9NZD4 102 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 GLS2Q9UI32 602 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 KIF25Q9UIL4 384 aa10.07□□□□□ -0.8
MTHFD1-210ENST00000555252 EDDM13A0A1B0GTR0 161 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 SMLR1H3BR10 107 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 TSC22D2O75157 780 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 SOX14O95416 240 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 ITGB8P26012 769 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 FEN1P39748 380 aaKnown RBP10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 GPR1P46091 355 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 GIPRP48546 466 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 MTNR1BP49286 362 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 SHC2P98077 582 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 TAP2Q03519 686 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 ENTPD8Q5MY95 495 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 LCTLQ6UWM7 567 aa10.06□□□□□ -0.8
MTHFD1-210ENST00000555252 FGD2Q7Z6J4 655 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms