RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 FCRLBQ6BAA4 426 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 H3F3CQ6NXT2 135 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 IGFL3Q6UXB1 125 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF621Q6ZSS3 439 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 SZRD1Q7Z422 152 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 PTRH1Q86Y79 214 aaKnown RBP10.11□□□□□ -0.79
SHMT2-218ENST00000555213 TAGAPQ8N103 731 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 BEST3Q8N1M1 668 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 HORMAD2Q8N7B1 307 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 OR52R1Q8NGF1 315 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 SLC22A8Q8TCC7 542 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 THAP3Q8WTV1 239 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-218ENST00000555213 OR5P2Q8WZ92 322 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 PSMF1Q92530 271 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 KAT2AQ92830 837 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 CTHRC1Q96CG8 243 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 PANX1Q96RD7 426 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 UTP23Q9BRU9 249 aaKnown RBP10.11□□□□□ -0.79
SHMT2-218ENST00000555213 WWTR1Q9GZV5 400 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 RNF32Q9H0A6 362 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 SLC25A18Q9H1K4 315 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 OR10A5Q9H207 317 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 CXorf36Q9H7Y0 433 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 C3orf14Q9HBI5 128 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 TAS2R9Q9NYW1 312 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 STMN3Q9NZ72 180 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 NKX1-2Q9UD57 310 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF223Q9UK11 482 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-218ENST00000555213 CELSR3Q9NYQ7 3312 aa10.11□□□□□ -0.79
SHMT2-218ENST00000555213 C2orf92A0A1B0GVN3 265 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 EIF4E1BA6NMX2 242 aaKnown RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 HRKO00198 91 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 PLOD2O00469 737 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 ABCB1P08183 1280 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 CT62P0C5K7 136 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 TCN1P20061 433 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 HTR1EP28566 365 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 PTGER1P34995 402 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 SOAT1P35610 550 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 SSR4P51571 173 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 NRG3P56975 720 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 MLF1P58340 268 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 DCAF7P61962 342 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 OC90Q02509 493 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 LY6DQ14210 128 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 EXOSC7Q15024 291 aaKnown RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 EBPQ15125 230 aaKnown RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 ZNHIT3Q15649 155 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 TRMT12Q53H54 448 aaKnown RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 BHLHB9Q6PI77 547 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 FAM111BQ6SJ93 734 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 DNAJC14Q6Y2X3 702 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 C9orf40Q8IXQ3 194 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 GPALPP1Q8IXQ4 340 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 ARMC10Q8N2F6 343 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 OR2L13Q8N349 312 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 TMEM156Q8N614 296 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF321PQ8N8H1 164 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 EXD3Q8N9H8 876 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 C17orf47Q8NEP4 570 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 OR7G2Q8NG99 324 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 OR10A6Q8NH74 314 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 DOK4Q8TEW6 326 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 ASB15Q8WXK1 588 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 MOAP1Q96BY2 351 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 MS4A4EQ96PG1 132 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 THUMPD3Q9BV44 507 aaKnown RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 CDCP1Q9H5V8 836 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 PIF1Q9H611 641 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 TPT1P8Q9HAU6 139 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF71Q9NQZ8 489 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 MYOTQ9UBF9 498 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 SUCOQ9UBS9 1254 aaKnown RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF639Q9UID6 485 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 YARS2Q9Y2Z4 477 aaKnown RBP10.1□□□□□ -0.79
SHMT2-218ENST00000555213 SNX8Q9Y5X2 465 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 SCN2AQ99250 2005 aa10.1□□□□□ -0.79
SHMT2-218ENST00000555213 DSPP15924 2871 aaKnown RBP10.09□□□□□ -0.79
SHMT2-218ENST00000555213 C15orf38-AP3S2A0A0A6YYH1 394 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 OR5H15A6NDH6 313 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 H0YHG0 523 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 H3BNX3 289 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 WWP2O00308 870 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 ITGA10O75578 1167 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 OR2J2O76002 312 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 ATP6V1G2O95670 118 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 CBX7O95931 251 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 NUDT7P0C024 238 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 ATP6V1B2P21281 511 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 CYB561P49447 251 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 TMED10P49755 219 aaKnown RBP10.09□□□□□ -0.79
SHMT2-218ENST00000555213 ERFP50548 548 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 CDK9P50750 372 aaKnown RBP10.09□□□□□ -0.79
SHMT2-218ENST00000555213 MGAT2Q10469 447 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 COX20Q5RI15 118 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 C1orf146Q5VVC0 180 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 OPN5Q6U736 354 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 IGFL2Q6UWQ7 119 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 TMEM64Q6YI46 380 aa10.09□□□□□ -0.79
SHMT2-218ENST00000555213 ARPINQ7Z6K5 226 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms