RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 TTTY12Q9BZ98 90 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 DPY30Q9C005 99 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 DEFB127Q9H1M4 99 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 CLMPQ9H6B4 373 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 OSGIN2Q9Y236 505 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 CFL2Q9Y281 166 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 GPR45Q9Y5Y3 372 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 BAHCC1Q9P281 2608 aa11.34□□□□□ -0.59
SYNE2-214ENST00000554928 TRPC5OSA6NMA1 111 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 B4DXG7 233 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 ADAM10O14672 748 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 DIAPH2O60879 1101 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 COQ9O75208 318 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 BCAS2O75934 225 aaPredicted RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 PDE9AO76083 593 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 IGKV1D-16P01601 117 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 CD1EP15812 388 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 MAP3K8P41279 467 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 ZFP36L2P47974 494 aaKnown RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 DGKQP52824 942 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 NRG3P56975 720 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 DCAF7P61962 342 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 PPIAP62937 165 aaKnown RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 HBA1P69905 142 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 LSM12Q3MHD2 195 aaKnown RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 SPANXN4Q5MJ08 99 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 EXOSC6Q5RKV6 272 aaKnown RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 FNDC7Q5VTL7 733 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 EPGNQ6UW88 154 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 GFRALQ6UXV0 394 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 SZRD1Q7Z422 152 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 CAMKMTQ7Z624 323 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 ANKRD46Q86W74 232 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 KIRREL3Q8IZU9 778 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 TMEM251Q8N6I4 163 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 FAM98AQ8NCA5 519 aaKnown RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 NUP43Q8NFH3 380 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 OR5AK3PQ8NH89 298 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 ZFP28Q8NHY6 868 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 ACTRT2Q8TDY3 377 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 OR5P2Q8WZ92 322 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 DIO2Q92813 273 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 HSPBAP1Q96EW2 488 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 MAGEB18Q96M61 343 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 ADOQ96SZ5 270 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 FAM173AQ9BQD7 235 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 LMF2Q9BU23 707 aaKnown RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 BHLHE41Q9C0J9 482 aaPredicted RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 GALNT9Q9HCQ5 603 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 TAS2R9Q9NYW1 312 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 NTMQ9P121 344 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 SEC14L3Q9UDX4 400 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.33□□□□□ -0.6
SYNE2-214ENST00000554928 EML6Q6ZMW3 1958 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 SVILO95425 2214 aa11.33□□□□□ -0.6
SYNE2-214ENST00000554928 MYO18BQ8IUG5 2567 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 SLCO1B7G3V0H7 640 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 TFECO14948 347 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-214ENST00000554928 ACOX3O15254 700 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 EMC8O43402 210 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 ASNA1O43681 348 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 TRIM3O75382 744 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-214ENST00000554928 REM1O75628 298 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 SLITRK5O94991 958 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 CYP4B1P13584 511 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 GABRA3P34903 492 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 RPL3P39023 403 aaKnown RBP11.32□□□□□ -0.6
SYNE2-214ENST00000554928 CASP3P42574 277 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 MAGEA5P43359 124 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 IDH3AP50213 366 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 KCNJ2P63252 427 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 MLC1Q15049 377 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 DUSP5Q16690 384 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 C1QL3Q5VWW1 255 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 MFSD12Q6NUT3 480 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 SPATA19Q7Z5L4 167 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 ZAR1Q86SH2 424 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 LRRC34Q8IZ02 419 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 SLC16A11Q8NCK7 471 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 OR9I1Q8NGQ6 314 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 PSMA8Q8TAA3 256 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 HOXB13Q92826 284 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-214ENST00000554928 JSRP1Q96MG2 331 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-214ENST00000554928 RILPQ96NA2 401 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 ANGPTL4Q9BY76 406 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 RTN4RQ9BZR6 473 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 SERHL2Q9H4I8 314 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 FBXO34Q9NWN3 711 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 TNFRSF10DQ9UBN6 386 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 ERRFI1Q9UJM3 462 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-214ENST00000554928 SNX8Q9Y5X2 465 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 KCNE3Q9Y6H6 103 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 FLNCQ14315 2725 aa11.32□□□□□ -0.6
SYNE2-214ENST00000554928 E9PBE3 544 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 GNB5O14775 395 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 CDC40O60508 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
SYNE2-214ENST00000554928 ICOSLGO75144 302 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 NKX2-2O95096 273 aa11.31□□□□□ -0.6
SYNE2-214ENST00000554928 CPSF4O95639 269 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms