RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 TAS2R7Q9NYW3 318 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MAT2BQ9NZL9 334 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 NOP53Q9NZM5 478 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 CNIH4Q9P003 139 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 MRTO4Q9UKD2 239 aaKnown RBP7.7□□□□□ -1.18
PSEN1-209ENST00000553855 OR10H1Q9Y4A9 318 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 CCL27Q9Y4X3 112 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 PTGDR2Q9Y5Y4 395 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 ATMQ13315 3056 aa7.7□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF462Q96JM2 2506 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 MEGF11A6BM72 1044 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 TTC36A6NLP5 189 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 MYO1GB0I1T2 1018 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 NPIPA5E9PKD4 350 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 HRKO00198 91 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 ITM2AO43736 263 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 HS6ST1O60243 411 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 CT62P0C5K7 136 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 NAT2P11245 290 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 H2AFXP16104 143 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 NAGAP17050 411 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 LBPP18428 481 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 SDC1P18827 310 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 PRPS1L1P21108 318 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 IL12BP29460 328 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 PPICP45877 212 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 PSMD4P55036 377 aaKnown RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 PER3P56645 1201 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 GPR85P60893 370 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 KCNJ2P63252 427 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 EMX2Q04743 252 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 BST1Q10588 318 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF155Q12901 538 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 EXOSC7Q15024 291 aaKnown RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 KIAA0040Q15053 153 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 RPS6KA2Q15349 733 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 LTB4RQ15722 352 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 LSM12Q3MHD2 195 aaKnown RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 UGT3A2Q3SY77 523 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 VPS26BQ4G0F5 336 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 HSP90B2PQ58FF3 399 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 XKR7Q5GH72 579 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 C6orf136Q5SQH8 315 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 IL23RQ5VWK5 629 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 FAM219BQ5XKK7 198 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 TMEM198Q66K66 360 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 NXNQ6DKJ4 435 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 FAM180BQ6P0A1 224 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 C16orf47Q6ZP98 133 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 EID3Q8N140 333 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 GHDCQ8N2G8 530 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 FAM26EQ8N5C1 309 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF615Q8N8J6 731 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 OR6Y1Q8NGX8 325 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 OR2T11Q8NH01 316 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 CEP70Q8NHQ1 597 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 CLHC1Q8NHS4 586 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 C16orf52Q8NHV5 167 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 DIO2Q92813 273 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 KAT2AQ92830 837 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 TMCO6Q96DC7 493 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 HSPBAP1Q96EW2 488 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 C11orf24Q96F05 449 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF764Q96H86 408 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 PPP1R36Q96LQ0 422 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 ZNF681Q96N22 645 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 FANCD2OSQ96PS1 177 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 C1orf50Q9BV19 199 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 HES7Q9BYE0 225 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 METTL7AQ9H8H3 244 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 SUCOQ9UBS9 1254 aaKnown RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 B4GALT7Q9UBV7 327 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 BAIAP2L1Q9UHR4 511 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 BOKQ9UMX3 212 aaPredicted RBP7.69□□□□□ -1.18
PSEN1-209ENST00000553855 PCDHGB4Q9UN71 923 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 NPIPA1Q9UND3 350 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 NTNG1Q9Y2I2 539 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 NPFFR2Q9Y5X5 522 aa7.69□□□□□ -1.18
PSEN1-209ENST00000553855 A0A087WV62 115 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 A0A1B0GUH1 482 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 A0A1W2PRB8 838 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 A0A1W2PS29 197 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ASPDHA6ND91 283 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 TMEM200CA6NKL6 621 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 HDAC3O15379 428 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CFLARO15519 480 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 PLOD3O60568 738 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 TBX19O60806 448 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ERN1O75460 977 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 REM1O75628 298 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 UBOX5O94941 541 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 UNC5CO95185 931 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CBX6O95503 412 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 KITP10721 976 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 ABOP16442 354 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 DRD5P21918 477 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 GPX3P22352 226 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 GCKP35557 465 aa7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CLK3P49761 638 aaKnown RBP7.68□□□□□ -1.18
PSEN1-209ENST00000553855 CLNS1AP54105 237 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms