RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ALOX15BO15296 676 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 COCHO43405 550 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 GATCO43716 136 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 KRT34O76011 436 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 GNA14O95837 355 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 ASS1P00966 412 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 HEXBP07686 556 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 SPARCP09486 303 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 CD99P14209 185 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 MAT2AP31153 395 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 PPARGP37231 505 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 PPP1R2P41236 205 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 APOBEC1P41238 236 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 GSSP48637 474 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 HOXA1P49639 335 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 IST1P53990 364 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 MFAP3P55082 362 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 RPL7AP62424 266 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 GNGT1P63211 74 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 NOP14P78316 857 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 MYL7Q01449 175 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 LGALS3BPQ08380 585 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 TAF10Q12962 218 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 MAD2L1Q13257 205 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 ENPP2Q13822 863 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 TSC22D1Q15714 1073 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 DPCR1Q3MIW9 517 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 AARDQ4LEZ3 155 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 ANKRD20A8PQ5CZ79 823 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 TCTE1Q5JU00 501 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 PDPK2PQ6A1A2 396 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 ADAM5Q6NVV9 412 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 PPP1R2P3Q6NXS1 205 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 RAD9BQ6WBX8 426 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 MMAAQ8IVH4 418 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 CCNYL1Q8N7R7 359 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 NOA1Q8NC60 698 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 THAP6Q8TBB0 222 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 UTP15Q8TED0 518 aaKnown RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 GRK7Q8WTQ7 553 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 CCDC12Q8WUD4 166 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 RAPGEF5Q92565 580 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 OTUB2Q96DC9 234 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 MMABQ96EY8 250 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 TCEANC2Q96MN5 208 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 CMTM3Q96MX0 182 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 RUNDC3BQ96NL0 473 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 PSD2Q9BQI7 771 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 NEURL2Q9BR09 285 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 MLPHQ9BV36 600 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-218ENST00000553309 ERVMER34-1Q9H9K5 563 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 KCNMB3Q9NPA1 279 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 GIN1Q9NXP7 522 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 SENP1Q9P0U3 644 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 OR14J1Q9UGF5 321 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 LNPEPQ9UIQ6 1025 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 IFT52Q9Y366 437 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 RP1P56715 2156 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 COL6A5A8TX70 2615 aa4.48□□□□□ -1.69
ATXN3-218ENST00000553309 TDRD6O60522 2096 aaKnown RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 A0A1B0GVC2 190 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 SMIM31A0A1B0GVY4 71 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 TTC26A0AVF1 554 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CTAGE9A4FU28 777 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 NPIPB15A6NHN6 443 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 KCNN4O15554 427 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 PAGE4O60829 102 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 JRKO75564 520 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CRTAPO75718 401 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 GAS8O95995 478 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CGAP01215 116 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 MT-ND3P03897 115 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CTAGE8P0CG41 777 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 FAM106CPP0CH98 169 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ALPPL2P10696 532 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ATP1A3P13637 1013 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 POU2F1P14859 743 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CLDN20P56880 219 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 RAB14P61106 215 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 UBE2IP63279 158 aaKnown RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CCZ1BP86790 482 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CCZ1P86791 482 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ZNF33BQ06732 778 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ASPHQ12797 758 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 SGCGQ13326 291 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 COTL1Q14019 142 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ZBTB6Q15916 424 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 RGS21Q2M5E4 152 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 DEFB133Q30KQ1 61 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 MAJINQ3KP22 176 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 NADK2Q4G0N4 442 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 SIRPB2Q5JXA9 342 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 LCE1EQ5T753 118 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 JADE1Q6IE81 842 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 TRIM65Q6PJ69 517 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 DENND5BQ6ZUT9 1274 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 ADAMTSL2Q86TH1 951 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 COMTD1Q86VU5 262 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 GALNT13Q8IUC8 556 aa4.47□□□□□ -1.69
ATXN3-218ENST00000553309 CTAGE4Q8IX94 777 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms