RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 INMTO95050 263 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 AGR2O95994 175 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 OSMP13725 252 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 RPS4Y1P22090 263 aaKnown RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 PRKAR1BP31321 381 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 MAP3K8P41279 467 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 HNRNPKP61978 463 aaKnown RBP eCLIP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 HPCAP84074 193 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 EMX1Q04741 257 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 DMWDQ09019 674 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 DUSP8Q13202 625 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 DGCR6Q14129 220 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 PTGES3Q15185 160 aaKnown RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 MLIPQ5VWP3 458 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 SLX4IPQ5VYV7 408 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 TMEM236Q5W0B7 351 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 PODNL1Q6PEZ8 512 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF836Q6ZNA1 936 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 DGAT2L6Q6ZPD8 337 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 AHSA2Q719I0 299 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 MORN4Q8NDC4 146 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 OR52P1PQ8NH57 321 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 SLC7A13Q8TCU3 470 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 IPCEF1Q8WWN9 437 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 DNASE2BQ8WZ79 361 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 DIO2Q92813 273 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 FKBP10Q96AY3 582 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 CTHRC1Q96CG8 243 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 TCTN2Q96GX1 697 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 RBCK1Q9BYM8 510 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 UCK2Q9BZX2 261 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF350Q9GZX5 532 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 PIGUQ9H490 435 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 PRDM6Q9NQX0 595 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 CTPS2Q9NRF8 586 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 UCKL1Q9NWZ5 548 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 SLC6A14Q9UN76 642 aa10.75□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF443Q9Y2A4 671 aaPredicted RBP10.75□□□□□ -0.69
RAB5C-208ENST00000551338 CENPVL1A0A0U1RR11 272 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 FCMRO60667 390 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 TPST2O60704 377 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 CBX7O95931 251 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 ALOX5P09917 674 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 ACVR2AP27037 513 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 CNR2P34972 360 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
RAB5C-208ENST00000551338 IDH2P48735 452 aaKnown RBP10.74□□□□□ -0.69
RAB5C-208ENST00000551338 CSNK1EP49674 416 aaKnown RBP10.74□□□□□ -0.69
RAB5C-208ENST00000551338 MAPK10P53779 464 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 EPHA4P54764 986 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 TMBIM6P55061 237 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 CSNK2BP67870 215 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 IGLV3-21P80748 117 aaPredicted RBP10.74□□□□□ -0.69
RAB5C-208ENST00000551338 MVKQ03426 396 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 ILKQ13418 452 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 EXOSC7Q15024 291 aaKnown RBP10.74□□□□□ -0.69
RAB5C-208ENST00000551338 INAVAQ3KP66 663 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 CCNJQ5T5M9 372 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 C12orf73Q69YU5 71 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 SLC16A12Q6ZSM3 486 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 PRSS48Q7RTY5 328 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 P3H2Q8IVL5 708 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF619Q8N2I2 560 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 CLIP4Q8N3C7 705 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 SDR16C5Q8N3Y7 309 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 SVOPQ8N4V2 548 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 ZNF540Q8NDQ6 660 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 OR4K5Q8NGD3 323 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 NR4A3Q92570 626 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 HOXB13Q92826 284 aaPredicted RBP10.74□□□□□ -0.69
RAB5C-208ENST00000551338 STACQ99469 402 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 SDF2Q99470 211 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 FNDC11Q9BVV2 318 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 RAB33BQ9H082 229 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 SAP130Q9H0E3 1048 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 TRIM45Q9H8W5 580 aaPredicted RBP10.74□□□□□ -0.69
RAB5C-208ENST00000551338 SEMA4GQ9NTN9 838 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 HCN3Q9P1Z3 774 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 NDOR1Q9UHB4 597 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 PSORS1C1Q9UIG5 152 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 MKLN1Q9UL63 735 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 PLCL2Q9UPR0 1127 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 SATB2Q9UPW6 733 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 WDR45Q9Y484 360 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 CLDN16Q9Y5I7 305 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 RNF215Q9Y6U7 377 aa10.74□□□□□ -0.69
RAB5C-208ENST00000551338 GON4LQ3T8J9 2241 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 IGHV5-51A0A0C4DH38 117 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 HRO43593 1189 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 NOL3O60936 208 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 NKX2-2O95096 273 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 SOX14O95416 240 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 NSA2O95478 260 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 FADS2O95864 444 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 DCNP07585 359 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 IGFBP1P08833 259 aaPredicted RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 SLC35E2P0CK97 266 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 RNH1P13489 461 aaKnown RBP10.73□□□□□ -0.69
RAB5C-208ENST00000551338 MMP11P24347 488 aa10.73□□□□□ -0.69
RAB5C-208ENST00000551338 TRHRP34981 398 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms