RNA–Protein interactions for RNA: ENST00000550857.5

PTPRB-209, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-209ENST00000550857 PRELID3BQ9Y3B1 194 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 KIAA1551Q9HCM1 1747 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 MEGF11A6BM72 1044 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 C2orf72A6NCS6 295 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 B4E171 279 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 K7ESM1 405 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 LATO43561 262 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PGRP06401 933 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 SLC35E2BP0CK96 405 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 SLC35E2P0CK97 266 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 CPOXP36551 454 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 TSPAN7P41732 249 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ARF5P84085 180 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ID2Q02363 134 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GAB1Q13480 694 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 MBTPS1Q14703 1052 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GFOD2Q3B7J2 385 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GLT8D1Q68CQ7 371 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 WDR53Q7Z5U6 358 aaPredicted RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 TMEM139Q8IV31 216 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZNF619Q8N2I2 560 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 FBXW8Q8N3Y1 598 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZNF540Q8NDQ6 660 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OR5B2Q96R09 309 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 MYNNQ9NPC7 610 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 DECR2Q9NUI1 292 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OLAHQ9NV23 265 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ACTR3BQ9P1U1 418 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GALPQ9UBC7 116 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PAIP2BQ9ULR5 123 aaKnown RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 CBLCQ9ULV8 474 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OR52A4PA6NMU1 304 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZNF749O43361 778 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZCCHC18P0CG32 403 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZNF888P0CJ79 500 aaPredicted RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 TSPAN5P62079 268 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 FAM53BQ14153 422 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 CES4AQ5XG92 561 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 AADACL2Q6P093 401 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 AAED1Q7RTV5 226 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZNF610Q8N9Z0 462 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GPR26Q8NDV2 337 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 SETD6Q8TBK2 473 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ELP5Q8TE02 316 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 LRRC15Q8TF66 581 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 NEDD4LQ96PU5 975 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 SARGQ9BW04 601 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OR10A5Q9H207 317 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OR10A2Q9H208 303 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OR51V1Q9H2C8 321 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 SOX17Q9H6I2 414 aaPredicted RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 DDX28Q9NUL7 540 aaKnown RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 IGHV1OR15-9A0A0B4J2B8 117 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PRAMEF25A6NGN4 478 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 BLOC1S5-TXNDC5H3BN57 136 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 BCKDKO14874 412 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 MT-ND2P03891 347 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 EIF1AXP47813 144 aaKnown RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ADARP55265 1226 aaKnown RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 SLC26A5P58743 744 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 HERV-K104P61576 105 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GPR18Q14330 331 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 MED22Q15528 200 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PYCR3Q53H96 274 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PMS2CLQ68D20 193 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZNF761Q86XN6 746 aaPredicted RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 YIPF7Q8N8F6 280 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ENKURQ8TC29 256 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PNPT1Q8TCS8 783 aaKnown RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 CA5BP1Q8WTZ4 195 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 COX4I2Q96KJ9 171 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 MARK4Q96L34 752 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 TRIM36Q9NQ86 728 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 STARD5Q9NSY2 213 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GIN1Q9NXP7 522 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 MYH4Q9Y623 1939 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GNB5O14775 395 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ARPC2O15144 300 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PLOD3O60568 738 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 C6orf47O95873 294 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZNF806P0C7X5 589 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 CEACAM1P13688 526 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OPRD1P41143 372 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ALDH3A2P51648 485 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 PITPNAQ00169 270 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ZP2Q05996 745 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 WBP2NLQ6ICG8 309 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OR4F3Q6IEY1 312 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 TRIM73Q86UV7 250 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 ACOT4Q8N9L9 421 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 OR10H4Q8NGA5 316 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 QPCTLQ9NXS2 382 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 RABL2AQ9UBK7 228 aaPredicted RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 NDRG4Q9ULP0 352 aaKnown RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 RABL2BQ9UNT1 228 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 CCL26Q9Y258 94 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 NOSIPQ9Y314 301 aaKnown RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 RNF11Q9Y3C5 154 aa7.61□□□□□ -1.19
PTPRB-209ENST00000550857 GPC6Q9Y625 555 aaPredicted RBP7.61□□□□□ -1.19
PTPRB-209ENST00000550857 SLC22A7Q9Y694 548 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms