RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MPP7Q5T2T1 576 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 TEX261Q6UWH6 196 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 CFAP206Q8IYR0 622 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 OR8H3Q8N146 312 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 GHDCQ8N2G8 530 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 OR11H7Q8NGC8 314 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 OR2A12Q8NGT7 310 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 LRRC20Q8TCA0 184 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 IL17FQ96PD4 163 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ACAT2Q9BWD1 397 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 MED28Q9H204 178 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 C11orf49Q9H6J7 331 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 FOLH1BQ9HBA9 442 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 NEUROD4Q9HD90 331 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 CNIH4Q9P003 139 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 SLC25A13Q9UJS0 675 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ADAM30Q9UKF2 790 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 PRELID1Q9Y255 219 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 U3KQ87 197 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 LINC00862A6NCI5 91 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 SNTNA6NMZ2 147 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 KDM4EB2RXH2 506 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-228ENST00000548938 TIMP1P01033 207 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ACRP10323 421 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ENPP1P22413 925 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ATP12AP54707 1039 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 MLLT1Q03111 559 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-228ENST00000548938 DSG2Q14126 1118 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ANGPT1Q15389 498 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 EOGTQ5NDL2 527 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 IDNKQ5T6J7 187 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 KIAA1161Q6NSJ0 714 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 TMEM107Q6UX40 140 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 LSRQ86X29 649 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-228ENST00000548938 LRRC56Q8IYG6 542 aaPredicted RBP12.91□□□□□ -0.34
HDAC7-228ENST00000548938 CPXM2Q8N436 756 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF680Q8NEM1 530 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 OR11H4Q8NGC9 324 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 SMG7Q92540 1137 aaKnown RBP12.91□□□□□ -0.34
HDAC7-228ENST00000548938 TM4SF18Q96CE8 201 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 SMG9Q9H0W8 520 aaKnown RBP12.91□□□□□ -0.34
HDAC7-228ENST00000548938 OR51I1Q9H343 314 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 COQ3Q9NZJ6 369 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 P2RX2Q9UBL9 471 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 TRPC4Q9UBN4 977 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF222Q9UK12 451 aa12.91□□□□□ -0.34
HDAC7-228ENST00000548938 KIF26AQ9ULI4 1882 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 CACNB4O00305 520 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 NRG2O14511 850 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 HRO43593 1189 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 SLC19A2O60779 497 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 NR2F1P10589 423 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 PTGER1P34995 402 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 BTCP35070 178 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 CCT3P49368 545 aaKnown RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 BTG1P62324 171 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 RAET1GQ6H3X3 334 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 FBXO46Q6PJ61 603 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 TMEM91Q6ZNR0 172 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 OR9A1PQ8NGU1 263 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 PCNPQ8WW12 178 aaKnown RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 SPRYD4Q8WW59 207 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 AUTS2Q8WXX7 1259 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 F2RL3Q96RI0 385 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 ABCG5Q9H222 651 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 PHF11Q9UIL8 331 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 PLAGL1Q9UM63 463 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 SLC9A8Q9Y2E8 581 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 A0A087WUU8 490 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 LZTS3O60299 673 aaPredicted RBP12.9□□□□□ -0.34
HDAC7-228ENST00000548938 LEFTY1O75610 366 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 PDGFAP04085 211 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 GABRR2P28476 465 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 NNMTP40261 264 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 TPGS2Q68CL5 300 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 HTR3DQ70Z44 454 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 LRRC17Q8N6Y2 441 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 POGLUT1Q8NBL1 392 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 PRRC1Q96M27 445 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 NRTNQ99748 197 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 ZNF649Q9BS31 505 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 NT5DC2Q9H857 520 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 NUDT15Q9NV35 164 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 SLCO1C1Q9NYB5 712 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 ING4Q9UNL4 249 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 POLHQ9Y253 713 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 ASB4Q9Y574 426 aa12.9□□□□□ -0.34
HDAC7-228ENST00000548938 CIB4A0PJX0 185 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 GJA1P17302 382 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 BUD31P41223 144 aaPredicted RBP12.9□□□□□ -0.35
HDAC7-228ENST00000548938 EPHB3P54753 998 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 PCBP4P57723 403 aaKnown RBP12.9□□□□□ -0.35
HDAC7-228ENST00000548938 RGS1Q08116 209 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 SLC30A6Q6NXT4 461 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 MRGPREQ86SM8 312 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 KLBQ86Z14 1044 aa12.9□□□□□ -0.35
HDAC7-228ENST00000548938 FBXL6Q8N531 539 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms