RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 KIAA1211LQ6NV74 962 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC22A25Q6T423 547 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PRSS55Q6UWB4 352 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 GPR135Q8IZ08 494 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF283Q8N7M2 679 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 OR4C15Q8NGM1 316 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SMOQ99835 787 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 NOX3Q9HBY0 568 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ASB6Q9NWX5 421 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 DHDHQ9UQ10 334 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC6A5Q9Y345 797 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 KCTD3Q9Y597 815 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 LOC102723532A0A0G2JNH3 316 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 EGFP01133 1207 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PIM1P11309 404 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PIPP12273 146 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 GIFP27352 417 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 MAT2AP31153 395 aaKnown RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PTH2RP49190 550 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 LUMP51884 338 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC35A2P78381 396 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 BAMBIQ13145 260 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 DHCR24Q15392 516 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 LRIT3Q3SXY7 679 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 CDNFQ49AH0 187 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 MINDY4Q4G0A6 757 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 LRIF1Q5T3J3 769 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 GDPD4Q6W3E5 623 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF546Q86UE3 836 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 FOXRED2Q8IWF2 684 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 THEM6Q8WUY1 208 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 TREX2Q9BQ50 279 aaPredicted RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ALG8Q9BVK2 526 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 DUSP21Q9H596 190 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 CLMPQ9H6B4 373 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 AKIP1Q9NQ31 210 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SERINC1Q9NRX5 453 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 C19orf12Q9NSK7 152 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 NRP1O14786 923 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC34A2O95436 690 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 OR8U9P0C7N5 309 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF35P13682 527 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 HSD11B1P28845 292 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 IL12BP29460 328 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 HTR3AP46098 478 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 P2RX3P56373 397 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ZNF91Q05481 1191 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC9B2Q86UD5 537 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PELI3Q8N2H9 469 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 AVL9Q8NBF6 648 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 METTL21AQ8WXB1 218 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PDLIM5Q96HC4 596 aaKnown RBP12.16□□□□□ -0.46
PTCH1-212ENST00000546744 SLC22A11Q9NSA0 550 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 DEC1Q9P2X7 70 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 FBXL3Q9UKT7 428 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 CYP8B1Q9UNU6 501 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 IMPA2O14732 288 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 CAPNS1P04632 268 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 THEGLP0DJG4 465 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 FUT4P22083 530 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 CHATP28329 748 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PTPN6P29350 595 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 HMGCLP35914 325 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PCGF3Q3KNV8 242 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 TIGD5Q53EQ6 642 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 PROKR1Q8TCW9 393 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 BABAM2Q9NXR7 383 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 LUZP4Q9P127 313 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 HIF3AQ9Y2N7 669 aa12.16□□□□□ -0.46
PTCH1-212ENST00000546744 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 OR6C65A6NJZ3 312 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 TMEM127O75204 238 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 NFATC1O95644 943 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 ZDHHC11BP0C7U3 371 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 C21orf33P30042 268 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-212ENST00000546744 CHRFAM7AQ494W8 412 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 RNF212Q495C1 297 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 OR2T4Q8NH00 348 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 OR8S1Q8NH09 359 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 DYNC2LI1Q8TCX1 351 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 GAL3ST1Q99999 423 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 OR51B5Q9H339 312 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 COPS7AQ9UBW8 275 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 CYB5R1Q9UHQ9 305 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 C1orf226A1L170 272 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 MEN1O00255 615 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 TO15178 435 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 TGOLN2O43493 480 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 PEX10O60683 326 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 SFTPBP07988 381 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 GKP32189 559 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 INHBEP58166 350 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 TAS2R19P59542 299 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 CCINQ13939 588 aa12.15□□□□□ -0.46
PTCH1-212ENST00000546744 FAM83HQ6ZRV2 1179 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-212ENST00000546744 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTCH1-212ENST00000546744 PXT1Q8NFP0 134 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms