RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 KCNJ5P48544 419 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 HLCSP50747 726 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 RBBP4Q09028 425 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 MICAQ29983 383 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 GUSBP11Q6P575 273 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 B3GLCTQ6Y288 498 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 C16orf47Q6ZP98 133 aaPredicted RBP11.17□□□□□ -0.62
CCDC38-202ENST00000546386 IQCHQ86VS3 1027 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 GALNT12Q8IXK2 581 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ENTHD1Q8IYW4 607 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 GJD3Q8N144 294 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 NT5CQ8TCD5 201 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ZNF607Q96SK3 696 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 SARGQ9BW04 601 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 ALOXE3Q9BYJ1 711 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 A4GALTQ9NPC4 353 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 GPR52Q9Y2T5 361 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 PCDHGA6Q9Y5G7 932 aa11.17□□□□□ -0.62
CCDC38-202ENST00000546386 DMXL2Q8TDJ6 3036 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 URADA6NGE7 173 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 SLC1A7O00341 560 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 EFNA3P52797 238 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 NR1H2P55055 460 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ALDH6A1Q02252 535 aaKnown RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 DUSP8Q13202 625 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 PTGES3Q15185 160 aaKnown RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 NPTX1Q15818 432 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ZNF691Q5VV52 312 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 IRAK1BP1Q5VVH5 260 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 TTC23Q5W5X9 447 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 MFSD12Q6NUT3 480 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 PODNL1Q6PEZ8 512 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 NKAIN4Q8IVV8 208 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 THAP3Q8WTV1 239 aaPredicted RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 TSLPQ969D9 159 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 OTULINQ96BN8 352 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 RBM18Q96H35 190 aaKnown RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 MPP4Q96JB8 637 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 CTRCQ99895 268 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 LHPPQ9H008 270 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 DSN1Q9H410 356 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 RERGLQ9H628 205 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 PAPOLBQ9NRJ5 636 aaKnown RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 GPR83Q9NYM4 423 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 GMEB2Q9UKD1 530 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ENTPD2Q9Y5L3 495 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 CEPT1Q9Y6K0 416 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ADAMDEC1O15204 470 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ZSCAN9O15535 394 aaPredicted RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 HRO43593 1189 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 PIP5K1CO60331 668 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 SERPINB7O75635 380 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 OR2B3O76000 313 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 PABPC4LP0CB38 370 aaKnown RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 GIMD1P0DJR0 217 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 KRT20P35900 424 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 KHKP50053 298 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 C14orf28Q4W4Y0 310 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 RNF44Q7L0R7 432 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 OR52P1PQ8NH57 321 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ADAMTS16Q8TE57 1224 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 GRHL3Q8TE85 626 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 APOBEC4Q8WW27 367 aaKnown RBP11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ZNF354BQ96LW1 612 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 PTCHD1Q96NR3 888 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 EGLN3Q9H6Z9 239 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 CXorf21Q9HAI6 301 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 A4GNTQ9UNA3 340 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ERVK-19Q9WJR5 959 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 RNF6Q9Y252 685 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 WDR45Q9Y484 360 aa11.16□□□□□ -0.62
CCDC38-202ENST00000546386 ADAM11O75078 769 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 WBP4O75554 376 aaKnown RBP11.15□□□□□ -0.62
CCDC38-202ENST00000546386 CCNB2O95067 398 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 GPR75O95800 540 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 ADRA2AP08913 450 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 CDH2P19022 906 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-202ENST00000546386 ELAVL4P26378 380 aaKnown RBP11.15□□□□□ -0.62
CCDC38-202ENST00000546386 CNR2P34972 360 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 CTSKP43235 329 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 GPR4P46093 362 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 MAN2A2P49641 1150 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 TRA2BP62995 288 aaKnown RBP11.15□□□□□ -0.62
CCDC38-202ENST00000546386 HPCAP84074 193 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 ZNF155Q12901 538 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-202ENST00000546386 SHBQ15464 509 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 KLHL35Q6PF15 583 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 GHDCQ8N2G8 530 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 COX18Q8N8Q8 333 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 OR4C15Q8NGM1 316 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 OR51Q1Q8NH59 317 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 APH1BQ8WW43 257 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 FNDC11Q9BVV2 318 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 ACTRT3Q9BYD9 372 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 AKIRIN1Q9H9L7 192 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-202ENST00000546386 SEMA4GQ9NTN9 838 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 MAT2BQ9NZL9 334 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 FER1L5A0AVI2 2057 aa11.15□□□□□ -0.62
CCDC38-202ENST00000546386 HEATR5AQ86XA9 2040 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms